RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 IMPDH2P12268 514 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 IGBP1P78318 339 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 HFE2Q6ZVN8 426 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 REXO1Q8N1G1 1221 aaKnown RBP10.48□□□□□ -0.73
RFC1-214ENST00000512726 ZCRB1Q8TBF4 217 aaKnown RBP10.48□□□□□ -0.73
RFC1-214ENST00000512726 KCNB2Q92953 911 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 POP1Q99575 1024 aaKnown RBP10.48□□□□□ -0.73
RFC1-214ENST00000512726 IGFLR1Q9H665 355 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 ACTR10Q9NZ32 417 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
RFC1-214ENST00000512726 BMP6P22004 513 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 FGFR3P22607 806 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 CEP135Q66GS9 1140 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 FAM169BQ8N8A8 192 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 MSRB2Q9Y3D2 182 aa10.47□□□□□ -0.73
RFC1-214ENST00000512726 CILPO75339 1184 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 B3GALT4O96024 378 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 IFRD2Q12894 506 aaPredicted RBP10.46□□□□□ -0.73
RFC1-214ENST00000512726 SEPT6Q14141 434 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 CCDC155Q8N6L0 562 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 GTPBP3Q969Y2 492 aaKnown RBP10.46□□□□□ -0.73
RFC1-214ENST00000512726 GPATCH3Q96I76 525 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 BRINP2Q9C0B6 783 aa10.46□□□□□ -0.73
RFC1-214ENST00000512726 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
RFC1-214ENST00000512726 DNAJB12Q9NXW2 375 aaKnown RBP10.46□□□□□ -0.73
RFC1-214ENST00000512726 TBC1D8BQ0IIM8 1120 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 DDR2Q16832 855 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 PLEKHG4Q58EX7 1191 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 SULF2Q8IWU5 870 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 MICALL1Q8N3F8 863 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
RFC1-214ENST00000512726 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
RFC1-214ENST00000512726 CBX8Q9HC52 389 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 BRMS1Q9HCU9 246 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 ZNRF3Q9ULT6 936 aa10.45□□□□□ -0.74
RFC1-214ENST00000512726 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 SOBPA7XYQ1 873 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 PTPRAP18433 802 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 ARNTP27540 789 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 RASIP1Q5U651 963 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 GK5Q6ZS86 529 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 CELF2-AS1Q8N7Q2 184 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 DDX54Q8TDD1 881 aaKnown RBP10.44□□□□□ -0.74
RFC1-214ENST00000512726 SH3TC2Q8TF17 1288 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 PLD4Q96BZ4 506 aa10.44□□□□□ -0.74
RFC1-214ENST00000512726 CDC45O75419 566 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 ANAPC15P60006 121 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 FXNQ16595 210 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 SCARA3Q6AZY7 606 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 SYT9Q86SS6 491 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 DNAJC7Q99615 494 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 ST7Q9NRC1 585 aa10.43□□□□□ -0.74
RFC1-214ENST00000512726 PPP1R12AO14974 1030 aaPredicted RBP10.42□□□□□ -0.74
RFC1-214ENST00000512726 PDPK1O15530 556 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 CLCQ05315 142 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 RASGRF1Q13972 1273 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 ZNF423Q2M1K9 1284 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 FILIP1Q7Z7B0 1213 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 RBBP8NLQ8NC74 664 aaPredicted RBP10.42□□□□□ -0.74
RFC1-214ENST00000512726 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 TMX1Q9H3N1 280 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 SOX13Q9UN79 622 aa10.42□□□□□ -0.74
RFC1-214ENST00000512726 NOP58Q9Y2X3 529 aaKnown RBP10.42□□□□□ -0.74
RFC1-214ENST00000512726 DNAJC6O75061 913 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 RGS20O76081 388 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 TRIM37O94972 964 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 ITGA6P23229 1130 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 FAM35AQ86V20 835 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 APPBP2Q92624 585 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 FANCLQ9NW38 375 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 MAPK8IP1Q9UQF2 711 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 PRKAB1Q9Y478 270 aa10.41□□□□□ -0.74
RFC1-214ENST00000512726 SIN3BO75182 1162 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 CPB1P15086 417 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 CASP7P55210 303 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 CTBSQ01459 385 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 RPL6Q02878 288 aaKnown RBP10.4□□□□□ -0.74
RFC1-214ENST00000512726 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
RFC1-214ENST00000512726 LARP1BQ659C4 914 aaKnown RBP10.4□□□□□ -0.74
RFC1-214ENST00000512726 VN1R5Q7Z5H4 357 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 LSRQ86X29 649 aaPredicted RBP10.4□□□□□ -0.74
RFC1-214ENST00000512726 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 LILRB2Q8N423 598 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 ADAM19Q9H013 955 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 EHMT1Q9H9B1 1298 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 SPC25Q9HBM1 224 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 IFT57Q9NWB7 429 aa10.4□□□□□ -0.74
RFC1-214ENST00000512726 PPP2R5EQ16537 467 aa10.39□□□□□ -0.75
RFC1-214ENST00000512726 TAF7LQ5H9L4 462 aa10.39□□□□□ -0.75
RFC1-214ENST00000512726 GRIN3AQ8TCU5 1115 aa10.39□□□□□ -0.75
RFC1-214ENST00000512726 STK35Q8TDR2 534 aa10.39□□□□□ -0.75
RFC1-214ENST00000512726 COL4A3BPQ9Y5P4 624 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms