RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CRKP46108 304 aa15.79■□□□□ 0.12
VEGFA-216ENST00000512683 TEPSINQ96N21 525 aa15.79■□□□□ 0.12
VEGFA-216ENST00000512683 PUS3Q9BZE2 481 aaKnown RBP15.79■□□□□ 0.12
VEGFA-216ENST00000512683 TDRD3Q9H7E2 651 aaKnown RBP15.79■□□□□ 0.12
VEGFA-216ENST00000512683 MAST3O60307 1309 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 FRAT2O75474 233 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-216ENST00000512683 WDHD1O75717 1129 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-216ENST00000512683 GTF2A2P52657 109 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 METTL24Q5JXM2 366 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 OTOP1Q7RTM1 612 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 FAM83AQ86UY5 434 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
VEGFA-216ENST00000512683 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 BICC1Q9H694 974 aaKnown RBP15.78■□□□□ 0.12
VEGFA-216ENST00000512683 HDAC5Q9UQL6 1122 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 TRIM17Q9Y577 477 aa15.78■□□□□ 0.12
VEGFA-216ENST00000512683 PDE4DIPQ5VU43 2346 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 IFIT1P09914 478 aaKnown RBP15.77■□□□□ 0.12
VEGFA-216ENST00000512683 SP3Q02447 781 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 TEKT1Q969V4 418 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 MS4A4AQ96JQ5 239 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 ZCCHC17Q9NP64 241 aaKnown RBP15.77■□□□□ 0.12
VEGFA-216ENST00000512683 FBXO3Q9UK99 471 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 FZD1Q9UP38 647 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 JAG2Q9Y219 1238 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 CSADQ9Y600 493 aa15.77■□□□□ 0.12
VEGFA-216ENST00000512683 SSC5DA1L4H1 1573 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 GJA5P36382 358 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 CRHR2Q13324 411 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 HHIPL2Q6UWX4 724 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.76■□□□□ 0.11
VEGFA-216ENST00000512683 ANKRD44Q8N8A2 993 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 VGLL2Q8N8G2 317 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 OPTNQ96CV9 577 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 PTPN18Q99952 460 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 EFCC1Q9HA90 598 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 TMOD2Q9NZR1 351 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 PTPN22Q9Y2R2 807 aa15.76■□□□□ 0.11
VEGFA-216ENST00000512683 ZBTB22O15209 634 aa15.75■□□□□ 0.11
VEGFA-216ENST00000512683 SLFN5Q08AF3 891 aa15.75■□□□□ 0.11
VEGFA-216ENST00000512683 PUM3Q15397 648 aaKnown RBP15.75■□□□□ 0.11
VEGFA-216ENST00000512683 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
VEGFA-216ENST00000512683 LRRC24Q50LG9 513 aa15.75■□□□□ 0.11
VEGFA-216ENST00000512683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.75■□□□□ 0.112e-42■□□□□ 10.2
VEGFA-216ENST00000512683 AOX1Q06278 1338 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 TCP10L2B9ZVM9 353 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 FGFR2P21802 821 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 WDR66Q8TBY9 1149 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 LPIN2Q92539 896 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 ARMC5Q96C12 935 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 ELP3Q9H9T3 547 aa15.74■□□□□ 0.11
VEGFA-216ENST00000512683 SPDYE5A6NIY4 337 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 EYA2O00167 538 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 CT47B1P0C2W7 299 aaPredicted RBP15.73■□□□□ 0.11
VEGFA-216ENST00000512683 CETPP11597 493 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 BCAMP50895 628 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 VGLL4Q14135 290 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 APOBEC3HQ6NTF7 200 aaKnown RBP15.73■□□□□ 0.11
VEGFA-216ENST00000512683 NBPF11Q86T75 865 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
VEGFA-216ENST00000512683 CCER2I3L3R5 266 aa15.72■□□□□ 0.11
VEGFA-216ENST00000512683 GNRH1P01148 92 aa15.72■□□□□ 0.11
VEGFA-216ENST00000512683 CHAF1AQ13111 956 aaPredicted RBP15.72■□□□□ 0.11
VEGFA-216ENST00000512683 TRMT2AQ8IZ69 625 aaKnown RBP15.72■□□□□ 0.11
VEGFA-216ENST00000512683 BRI3BPQ8WY22 251 aa15.72■□□□□ 0.11
VEGFA-216ENST00000512683 SSH1Q8WYL5 1049 aa15.72■□□□□ 0.11
VEGFA-216ENST00000512683 CCL15-CCL14A0A0B4J2E2 113 aa15.71■□□□□ 0.11
VEGFA-216ENST00000512683 SLC5A1P13866 664 aa15.71■□□□□ 0.11
VEGFA-216ENST00000512683 CCL15Q16663 113 aa15.71■□□□□ 0.11
VEGFA-216ENST00000512683 CD99L2Q8TCZ2 262 aa15.71■□□□□ 0.11
VEGFA-216ENST00000512683 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
VEGFA-216ENST00000512683 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
VEGFA-216ENST00000512683 CIAO1O76071 339 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 RFX5P48382 616 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-216ENST00000512683 PRMT2P55345 433 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 PPATQ06203 517 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 PPIL2Q13356 520 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 TAF1CQ15572 869 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-216ENST00000512683 GRIK5Q16478 980 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 FAM151AQ8WW52 585 aa15.7■□□□□ 0.1
VEGFA-216ENST00000512683 SEMA3EO15041 775 aa15.69■□□□□ 0.1
VEGFA-216ENST00000512683 TLR2O60603 784 aa15.69■□□□□ 0.1
VEGFA-216ENST00000512683 KIF22Q14807 665 aa15.69■□□□□ 0.1
VEGFA-216ENST00000512683 TMEM106CQ9BVX2 250 aa15.69■□□□□ 0.1
VEGFA-216ENST00000512683 ZNF341Q9BYN7 854 aa15.69■□□□□ 0.1
VEGFA-216ENST00000512683 CEP126Q9P2H0 1117 aa15.69■□□□□ 0.1
VEGFA-216ENST00000512683 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
VEGFA-216ENST00000512683 RPAP1Q9BWH6 1393 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-216ENST00000512683 CDAN1Q8IWY9 1227 aa15.68■□□□□ 0.1
VEGFA-216ENST00000512683 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
VEGFA-216ENST00000512683 WRNIP1Q96S55 665 aa15.68■□□□□ 0.1
VEGFA-216ENST00000512683 ZNF112Q9UJU3 913 aa15.68■□□□□ 0.1
VEGFA-216ENST00000512683 SNCAIPQ9Y6H5 919 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms