RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TRMT2AQ8IZ69 625 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-229ENST00000512418 CLMNQ96JQ2 1002 aa18.43■□□□□ 0.54
CCHCR1-229ENST00000512418 TDRD3Q9H7E2 651 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-229ENST00000512418 IQSEC3Q9UPP2 1182 aaPredicted RBP18.43■□□□□ 0.54
CCHCR1-229ENST00000512418 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
CCHCR1-229ENST00000512418 WNK4Q96J92 1243 aa18.42■□□□□ 0.54
CCHCR1-229ENST00000512418 IFIT1P09914 478 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-229ENST00000512418 BCAMP50895 628 aa18.41■□□□□ 0.54
CCHCR1-229ENST00000512418 ANKRD13AQ8IZ07 590 aa18.41■□□□□ 0.54
CCHCR1-229ENST00000512418 EYA2O00167 538 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 USP2O75604 605 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 FGFR2P21802 821 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 RFX5P48382 616 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 TNNI2P48788 182 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 GRIK5Q16478 980 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 IFNL1Q8IU54 200 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 TEKT1Q969V4 418 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 OTOFQ9HC10 1997 aa18.4■□□□□ 0.54
CCHCR1-229ENST00000512418 TCP10L2B9ZVM9 353 aa18.39■□□□□ 0.53
CCHCR1-229ENST00000512418 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-229ENST00000512418 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
CCHCR1-229ENST00000512418 SUGT1Q9Y2Z0 365 aa18.39■□□□□ 0.53
CCHCR1-229ENST00000512418 MAST3O60307 1309 aa18.39■□□□□ 0.53
CCHCR1-229ENST00000512418 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 FKTNO75072 461 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 SLC5A1P13866 664 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 LPIN2Q92539 896 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 MRIQ9BWK5 157 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 TMEM39BQ9GZU3 492 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 R3HDMLQ9H3Y0 253 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 FBXO3Q9UK99 471 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 HPS5Q9UPZ3 1129 aa18.38■□□□□ 0.53
CCHCR1-229ENST00000512418 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
CCHCR1-229ENST00000512418 ZDHHC15Q96MV8 337 aa18.37■□□□□ 0.53
CCHCR1-229ENST00000512418 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
CCHCR1-229ENST00000512418 MYH13Q9UKX3 1938 aa18.37■□□□□ 0.53
CCHCR1-229ENST00000512418 IGF2BP3O00425 579 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 CIAO1O76071 339 aa18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 GJA5P36382 358 aa18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 SOX10P56693 466 aa18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 OTUD7BQ6GQQ9 843 aa18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 ATG9AQ7Z3C6 839 aa18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 TMOD2Q9NZR1 351 aa18.36■□□□□ 0.53
CCHCR1-229ENST00000512418 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
CCHCR1-229ENST00000512418 WDR66Q8TBY9 1149 aa18.35■□□□□ 0.53
CCHCR1-229ENST00000512418 OPTNQ96CV9 577 aa18.35■□□□□ 0.53
CCHCR1-229ENST00000512418 ELP3Q9H9T3 547 aa18.35■□□□□ 0.53
CCHCR1-229ENST00000512418 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 CACNB3P54284 484 aa18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 FKBP1CQ5VVH2 108 aa18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 APOBEC3HQ6NTF7 200 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 HHIPL2Q6UWX4 724 aa18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 FAM83AQ86UY5 434 aa18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 SIL1Q9H173 461 aa18.34■□□□□ 0.53
CCHCR1-229ENST00000512418 TNRC18O15417 2968 aaPredicted RBP18.33■□□□□ 0.52
CCHCR1-229ENST00000512418 VGLL4Q14135 290 aa18.33■□□□□ 0.52
CCHCR1-229ENST00000512418 ATP2B3Q16720 1220 aa18.33■□□□□ 0.52
CCHCR1-229ENST00000512418 CEP126Q9P2H0 1117 aa18.33■□□□□ 0.52
CCHCR1-229ENST00000512418 CSADQ9Y600 493 aa18.33■□□□□ 0.52
CCHCR1-229ENST00000512418 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-229ENST00000512418 RPAP1Q9BWH6 1393 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-229ENST00000512418 IL15P40933 162 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-229ENST00000512418 RARSP54136 660 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-229ENST00000512418 MAP3K9P80192 1104 aa18.32■□□□□ 0.52
CCHCR1-229ENST00000512418 HOOK2Q96ED9 719 aa18.32■□□□□ 0.52
CCHCR1-229ENST00000512418 CRHR2Q13324 411 aa18.31■□□□□ 0.52
CCHCR1-229ENST00000512418 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
CCHCR1-229ENST00000512418 MS4A4AQ96JQ5 239 aa18.31■□□□□ 0.52
CCHCR1-229ENST00000512418 MEIS3Q99687 375 aa18.31■□□□□ 0.52
CCHCR1-229ENST00000512418 PTPN18Q99952 460 aa18.31■□□□□ 0.52
CCHCR1-229ENST00000512418 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-229ENST00000512418 HTTP42858 3142 aa18.3■□□□□ 0.52
CCHCR1-229ENST00000512418 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
CCHCR1-229ENST00000512418 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
CCHCR1-229ENST00000512418 TRIM17Q9Y577 477 aa18.3■□□□□ 0.52
CCHCR1-229ENST00000512418 SEMA3EO15041 775 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 GTF2A2P52657 109 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 DCAF15Q66K64 600 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 OTOP1Q7RTM1 612 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 ERO1AQ96HE7 468 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 WRNIP1Q96S55 665 aa18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 PA2G4Q9UQ80 394 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-229ENST00000512418 SALL1Q9NSC2 1324 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 CCL15-CCL14A0A0B4J2E2 113 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 ZBTB22O15209 634 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 GNAI3P08754 354 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 PRDX5P30044 214 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 CCL15Q16663 113 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 BRI3BPQ8WY22 251 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 DAGLAQ9Y4D2 1042 aa18.28■□□□□ 0.52
CCHCR1-229ENST00000512418 SNCAIPQ9Y6H5 919 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms