RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TRAPPC3LQ5T215 181 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 KIF6Q6ZMV9 814 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 Q6ZVU0 165 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 ZNF784Q8NCA9 323 aaPredicted RBP12.01□□□□□ -0.49
SNF8-211ENST00000512243 ARXQ96QS3 562 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 PNPLA7Q6ZV29 1317 aa12.01□□□□□ -0.49
SNF8-211ENST00000512243 RFC4P35249 363 aa12□□□□□ -0.49
SNF8-211ENST00000512243 RARSP54136 660 aaKnown RBP12□□□□□ -0.49
SNF8-211ENST00000512243 SMIM5Q71RC9 77 aa12□□□□□ -0.49
SNF8-211ENST00000512243 XAGE3Q8WTP9 111 aa12□□□□□ -0.49
SNF8-211ENST00000512243 SSH1Q8WYL5 1049 aa12□□□□□ -0.49
SNF8-211ENST00000512243 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
SNF8-211ENST00000512243 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
SNF8-211ENST00000512243 ESPNB1AK53 854 aa11.99□□□□□ -0.49
SNF8-211ENST00000512243 DDX58O95786 925 aaKnown RBP11.99□□□□□ -0.49
SNF8-211ENST00000512243 RELBQ01201 579 aa11.99□□□□□ -0.49
SNF8-211ENST00000512243 AIMP1Q12904 312 aaKnown RBP11.99□□□□□ -0.49
SNF8-211ENST00000512243 FLIIQ13045 1269 aa11.99□□□□□ -0.49
SNF8-211ENST00000512243 R3HDM1Q15032 1099 aaKnown RBP11.99□□□□□ -0.49
SNF8-211ENST00000512243 LRP10Q7Z4F1 713 aa11.99□□□□□ -0.49
SNF8-211ENST00000512243 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
SNF8-211ENST00000512243 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
SNF8-211ENST00000512243 MAP3K15Q6ZN16 1313 aa11.98□□□□□ -0.49
SNF8-211ENST00000512243 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
SNF8-211ENST00000512243 TTLL7Q6ZT98 887 aa11.98□□□□□ -0.49
SNF8-211ENST00000512243 COPS6Q7L5N1 327 aa11.98□□□□□ -0.49
SNF8-211ENST00000512243 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
SNF8-211ENST00000512243 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
SNF8-211ENST00000512243 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
SNF8-211ENST00000512243 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
SNF8-211ENST00000512243 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
SNF8-211ENST00000512243 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
SNF8-211ENST00000512243 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
SNF8-211ENST00000512243 NR1H3Q13133 447 aa11.97□□□□□ -0.49
SNF8-211ENST00000512243 FKBP5Q13451 457 aaPredicted RBP11.97□□□□□ -0.49
SNF8-211ENST00000512243 G2E3Q7L622 706 aa11.97□□□□□ -0.49
SNF8-211ENST00000512243 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
SNF8-211ENST00000512243 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
SNF8-211ENST00000512243 PTPRCP08575 1304 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 FIGNL2A6NMB9 653 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 TTLL8A6PVC2 850 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 H3BM21 787 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 CYLDQ9NQC7 956 aa11.96□□□□□ -0.49
SNF8-211ENST00000512243 APBB1O00213 710 aa11.95□□□□□ -0.5
SNF8-211ENST00000512243 SPINT1O43278 529 aa11.95□□□□□ -0.5
SNF8-211ENST00000512243 LILRA1O75019 489 aa11.95□□□□□ -0.5
SNF8-211ENST00000512243 BCAR3O75815 825 aa11.95□□□□□ -0.5
SNF8-211ENST00000512243 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
SNF8-211ENST00000512243 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
SNF8-211ENST00000512243 ADCY9O60503 1353 aa11.94□□□□□ -0.5
SNF8-211ENST00000512243 IPO8O15397 1037 aaKnown RBP11.94□□□□□ -0.5
SNF8-211ENST00000512243 GYS1P13807 737 aa11.94□□□□□ -0.5
SNF8-211ENST00000512243 ADD1P35611 737 aaKnown RBP11.94□□□□□ -0.5
SNF8-211ENST00000512243 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
SNF8-211ENST00000512243 KSR2Q6VAB6 950 aa11.94□□□□□ -0.5
SNF8-211ENST00000512243 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
SNF8-211ENST00000512243 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
SNF8-211ENST00000512243 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 CENPBP07199 599 aaPredicted RBP11.93□□□□□ -0.5
SNF8-211ENST00000512243 HLFQ16534 295 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 MSL1Q68DK7 614 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 NPAS3Q8IXF0 933 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 FRAT1Q92837 279 aaPredicted RBP11.93□□□□□ -0.5
SNF8-211ENST00000512243 INSM2Q96T92 566 aaPredicted RBP11.93□□□□□ -0.5
SNF8-211ENST00000512243 API5Q9BZZ5 524 aaKnown RBP11.93□□□□□ -0.5
SNF8-211ENST00000512243 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
SNF8-211ENST00000512243 MAP3K2Q9Y2U5 619 aa11.93□□□□□ -0.5
SNF8-211ENST00000512243 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 WIPF1O43516 503 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 ADH1AP07327 375 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 CTSOP43234 321 aaPredicted RBP11.92□□□□□ -0.5
SNF8-211ENST00000512243 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
SNF8-211ENST00000512243 IRF7Q92985 503 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 MTFR1LQ9H019 292 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 LAMB2P55268 1798 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 MYH3P11055 1940 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
SNF8-211ENST00000512243 F6X3S4 739 aa11.91□□□□□ -0.5
SNF8-211ENST00000512243 GMPRP36959 345 aa11.91□□□□□ -0.5
SNF8-211ENST00000512243 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
SNF8-211ENST00000512243 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
SNF8-211ENST00000512243 ARHGAP45Q92619 1136 aa11.91□□□□□ -0.5
SNF8-211ENST00000512243 MYD88Q99836 296 aa11.91□□□□□ -0.5
SNF8-211ENST00000512243 METTL22Q9BUU2 404 aaPredicted RBP11.91□□□□□ -0.5
SNF8-211ENST00000512243 POLMQ9NP87 494 aaPredicted RBP11.91□□□□□ -0.5
SNF8-211ENST00000512243 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNF8-211ENST00000512243 GPTP24298 496 aa11.9□□□□□ -0.5
SNF8-211ENST00000512243 POLD1P28340 1107 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms