RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PPP1R1BQ9UD71 204 aaPredicted RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.17□□□□□ -0.942e-6■■□□□ 11.7
NEK1-208ENST00000512193 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 TMCO5BA8MYB1 307 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 ASIC1P78348 528 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 ZNF174Q15697 407 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 DIS3L2Q8IYB7 885 aaKnown RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 PRR36Q9H6K5 1346 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 VWA3AA6NCI4 1184 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 ZNF500O60304 480 aaPredicted RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 MCM3P25205 808 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 ZNF569Q5MCW4 686 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 CTR9Q6PD62 1173 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 VPS36Q86VN1 386 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 MCM9Q9NXL9 1143 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 POLR2DO15514 142 aaKnown RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 PHACTR2O75167 634 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 CUL4AQ13619 759 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 BAG1Q99933 345 aaPredicted RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 SRRTQ9BXP5 876 aaKnown RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 TLR7Q9NYK1 1049 aaKnown RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 GUCA1BQ9UMX6 200 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 AATKQ6ZMQ8 1374 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 SHTN1A0MZ66 631 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 SSR1P43307 286 aaKnown RBP9.16□□□□□ -0.94
NEK1-208ENST00000512193 HSPA2P54652 639 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 KRT40Q6A162 431 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 DNAJC10Q8IXB1 793 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 BCCIPQ9P287 314 aaKnown RBP eCLIP9.16□□□□□ -0.94
NEK1-208ENST00000512193 MYOM2P54296 1465 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 RGS12O14924 1447 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 TAF5LO75529 589 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 CYLC1P35663 651 aaPredicted RBP9.16□□□□□ -0.94
NEK1-208ENST00000512193 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
NEK1-208ENST00000512193 FAM114A1Q8IWE2 563 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 ALS2CR12Q96Q35 445 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 CCDC113Q9H0I3 377 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 MMRN2Q9H8L6 949 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 MAPK8IP1Q9UQF2 711 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 PRAMEF22A3QJZ6 481 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 RHOXF2BP0C7M4 288 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 GNAT2P19087 354 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 KRT2P35908 639 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 TTLL7Q6ZT98 887 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
NEK1-208ENST00000512193 KIF20AO95235 890 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 NAPAP54920 295 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 EVCP57679 992 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 PRPF4BQ13523 1007 aaKnown RBP9.15□□□□□ -0.94
NEK1-208ENST00000512193 RILPL1Q5EBL4 403 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 MAP4K1Q92918 833 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 TMEM87BQ96K49 555 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 TMOD2Q9NZR1 351 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
NEK1-208ENST00000512193 FAM135BQ49AJ0 1406 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 hCG_1642624A0A1W2PR95 340 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.94
NEK1-208ENST00000512193 GNAQP50148 359 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 TERF1P54274 439 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 UBXN1Q04323 297 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 ELF2Q15723 593 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 GOLGA1Q92805 767 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 ERO1AQ96HE7 468 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 SETDB2Q96T68 719 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 KCNJ14Q9UNX9 436 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 MYO5CQ9NQX4 1742 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 F8W031 263 aaPredicted RBP9.15□□□□□ -0.94
NEK1-208ENST00000512193 TUBB4AP04350 444 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 ADD1P35611 737 aaKnown RBP9.15□□□□□ -0.94
NEK1-208ENST00000512193 MYSM1Q5VVJ2 828 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 STAMQ92783 540 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 CAPZA3Q96KX2 299 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 XPO4Q9C0E2 1151 aaKnown RBP9.15□□□□□ -0.94
NEK1-208ENST00000512193 VPS16Q9H269 839 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 NFE2L3Q9Y4A8 694 aa9.15□□□□□ -0.94
NEK1-208ENST00000512193 USP8P40818 1118 aa9.15□□□□□ -0.95
NEK1-208ENST00000512193 DDB1Q16531 1140 aa9.15□□□□□ -0.95
NEK1-208ENST00000512193 SLF2Q8IX21 1173 aa9.15□□□□□ -0.95
NEK1-208ENST00000512193 FEZ1Q99689 392 aa9.15□□□□□ -0.95
NEK1-208ENST00000512193 CARD6Q9BX69 1037 aa9.15□□□□□ -0.95
NEK1-208ENST00000512193 DBNLQ9UJU6 430 aaKnown RBP9.15□□□□□ -0.95
NEK1-208ENST00000512193 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 PCDH11XQ9BZA7 1347 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 PCDH11YQ9BZA8 1340 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 CALML3P27482 149 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 ARID5AQ03989 594 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 CTDSPL2Q05D32 466 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 IFFO1Q0D2I5 559 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 SPAG5Q96R06 1193 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 OGFRQ9NZT2 677 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 A0A087WWV3 80 aa9.14□□□□□ -0.95
NEK1-208ENST00000512193 LARGE1O95461 756 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms