RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GREM2Q9H772 168 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
NUP54-211ENST00000512151 SNAP23O00161 211 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 MAGEA10P43363 369 aaPredicted RBP11.88□□□□□ -0.51
NUP54-211ENST00000512151 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
NUP54-211ENST00000512151 CTSWP56202 376 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 PRKCZQ05513 592 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 C7orf61Q8IZ16 206 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 CDC5LQ99459 802 aaKnown RBP11.88□□□□□ -0.51
NUP54-211ENST00000512151 CD209Q9NNX6 404 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 GABRQQ9UN88 632 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 LEMD3Q9Y2U8 911 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 RPTORQ8N122 1335 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
NUP54-211ENST00000512151 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
NUP54-211ENST00000512151 CETPP11597 493 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 SYN1P17600 705 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 COL9A1P20849 921 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 UBXN2AP68543 259 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 TTLL11Q8NHH1 800 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 PAWRQ96IZ0 340 aaKnown RBP11.87□□□□□ -0.51
NUP54-211ENST00000512151 TMEM39BQ9GZU3 492 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 ZCCHC17Q9NP64 241 aaKnown RBP11.87□□□□□ -0.51
NUP54-211ENST00000512151 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
NUP54-211ENST00000512151 ZNF70Q9UC06 446 aaPredicted RBP11.87□□□□□ -0.51
NUP54-211ENST00000512151 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
NUP54-211ENST00000512151 CHL1O00533 1208 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 IRF6O14896 467 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 MYO1BO43795 1136 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
NUP54-211ENST00000512151 HSP90B1P14625 803 aaKnown RBP11.86□□□□□ -0.51
NUP54-211ENST00000512151 RIPK4P57078 832 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 DEFB118Q96PH6 123 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
NUP54-211ENST00000512151 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
NUP54-211ENST00000512151 ELNP15502 786 aa11.85□□□□□ -0.51
NUP54-211ENST00000512151 HOXD10P28358 340 aa11.85□□□□□ -0.51
NUP54-211ENST00000512151 TDRD3Q9H7E2 651 aaKnown RBP11.85□□□□□ -0.51
NUP54-211ENST00000512151 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
NUP54-211ENST00000512151 CSADQ9Y600 493 aa11.85□□□□□ -0.51
NUP54-211ENST00000512151 ARAP2Q8WZ64 1704 aa11.85□□□□□ -0.51
NUP54-211ENST00000512151 MAPK8IP3Q9UPT6 1336 aa11.85□□□□□ -0.51
NUP54-211ENST00000512151 MGAMO43451 1857 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 TCP10L2B9ZVM9 353 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
NUP54-211ENST00000512151 INHAP05111 366 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 RBM5P52756 815 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUP54-211ENST00000512151 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 ZKSCAN4Q969J2 545 aaPredicted RBP11.84□□□□□ -0.51
NUP54-211ENST00000512151 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
NUP54-211ENST00000512151 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
NUP54-211ENST00000512151 ADCY3O60266 1144 aa11.83□□□□□ -0.52
NUP54-211ENST00000512151 MOGSQ13724 837 aa11.83□□□□□ -0.52
NUP54-211ENST00000512151 ERO1BQ86YB8 467 aa11.83□□□□□ -0.52
NUP54-211ENST00000512151 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
NUP54-211ENST00000512151 PAK6Q9NQU5 681 aaPredicted RBP11.83□□□□□ -0.52
NUP54-211ENST00000512151 MYH3P11055 1940 aa11.83□□□□□ -0.52
NUP54-211ENST00000512151 PDHXO00330 501 aa11.82□□□□□ -0.52
NUP54-211ENST00000512151 HOXB7P09629 217 aa11.82□□□□□ -0.52
NUP54-211ENST00000512151 BCRP11274 1271 aa11.82□□□□□ -0.52
NUP54-211ENST00000512151 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
NUP54-211ENST00000512151 PPIL2Q13356 520 aa11.82□□□□□ -0.52
NUP54-211ENST00000512151 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
NUP54-211ENST00000512151 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
NUP54-211ENST00000512151 IL1R1P14778 569 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
NUP54-211ENST00000512151 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
NUP54-211ENST00000512151 TNFAIP1Q13829 316 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 FAM109BQ6ICB4 259 aaPredicted RBP11.81□□□□□ -0.52
NUP54-211ENST00000512151 NECAB2Q7Z6G3 386 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 ANKRD23Q86SG2 305 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.81□□□□□ -0.52
NUP54-211ENST00000512151 WRNIP1Q96S55 665 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
NUP54-211ENST00000512151 ANKRD2Q9GZV1 360 aa11.81□□□□□ -0.52
NUP54-211ENST00000512151 TAF5LO75529 589 aa11.8□□□□□ -0.52
NUP54-211ENST00000512151 IGKV5-2P06315 115 aa11.8□□□□□ -0.52
NUP54-211ENST00000512151 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
NUP54-211ENST00000512151 FLT3LGP49771 235 aa11.8□□□□□ -0.52
NUP54-211ENST00000512151 FCGRTP55899 365 aa11.8□□□□□ -0.52
NUP54-211ENST00000512151 CHRNDQ07001 517 aa11.8□□□□□ -0.52
NUP54-211ENST00000512151 C15orf52Q6ZUT6 534 aaKnown RBP11.8□□□□□ -0.52
NUP54-211ENST00000512151 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
NUP54-211ENST00000512151 COL2A1P02458 1487 aaPredicted RBP11.8□□□□□ -0.52
NUP54-211ENST00000512151 CYP2C8P10632 490 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 KCNJ4P48050 445 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 CACNB3P54284 484 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 A0A1B0GUL6 1792 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 ITGA6P23229 1130 aa11.79□□□□□ -0.52
NUP54-211ENST00000512151 INPP5BP32019 993 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms