RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DNAAF4Q8WXU2 420 aa24.3■■□□□ 1.48
HMGCS1-206ENST00000511774 COL6A3P12111 3177 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 PLIN1O60240 522 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 CTGFP29279 349 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 GTF2A2P52657 109 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 MAP3K9P80192 1104 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 MFSD14BQ5SR56 506 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 DZIP1LQ8IYY4 767 aaKnown RBP24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 LINS1Q8NG48 757 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 TTF2Q9UNY4 1162 aaKnown RBP24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 A0A0C4DFX4 3053 aa24.29■■□□□ 1.48
HMGCS1-206ENST00000511774 IFIT5Q13325 482 aaKnown RBP24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 TNFAIP1Q13829 316 aa24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 MTFR1Q15390 333 aa24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 TDRD7Q8NHU6 1098 aaKnown RBP24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 SERPINA10Q9UK55 444 aa24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 SNCAIPQ9Y6H5 919 aa24.28■■□□□ 1.48
HMGCS1-206ENST00000511774 BTBD19C9JJ37 291 aa24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 ECM2O94769 699 aaPredicted RBP24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 LACTBP83111 547 aaPredicted RBP24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 RBM27Q9P2N5 1060 aaKnown RBP24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 CHMP3Q9Y3E7 222 aa24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 LAMA3Q16787 3333 aa24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 CACNA1FO60840 1977 aa24.27■■□□□ 1.48
HMGCS1-206ENST00000511774 TLR2O60603 784 aa24.26■■□□□ 1.47
HMGCS1-206ENST00000511774 GYG1P46976 350 aa24.26■■□□□ 1.47
HMGCS1-206ENST00000511774 FKBP5Q13451 457 aaPredicted RBP24.26■■□□□ 1.47
HMGCS1-206ENST00000511774 SPDYE5A6NIY4 337 aa24.25■■□□□ 1.47
HMGCS1-206ENST00000511774 CRKP46108 304 aa24.25■■□□□ 1.47
HMGCS1-206ENST00000511774 CACNB3P54284 484 aa24.25■■□□□ 1.47
HMGCS1-206ENST00000511774 ARHGEF6Q15052 776 aa24.25■■□□□ 1.47
HMGCS1-206ENST00000511774 LMBR1LQ6UX01 489 aa24.25■■□□□ 1.47
HMGCS1-206ENST00000511774 PRKRIP1Q9H875 184 aaPredicted RBP24.25■■□□□ 1.47
HMGCS1-206ENST00000511774 CUL9Q8IWT3 2517 aa24.24■■□□□ 1.47
HMGCS1-206ENST00000511774 FAM84BQ96KN1 310 aaPredicted RBP24.24■■□□□ 1.47
HMGCS1-206ENST00000511774 F6X3S4 739 aa24.23■■□□□ 1.47
HMGCS1-206ENST00000511774 LDHAL6AQ6ZMR3 332 aa24.23■■□□□ 1.47
HMGCS1-206ENST00000511774 ZKSCAN4Q969J2 545 aaPredicted RBP24.23■■□□□ 1.47
HMGCS1-206ENST00000511774 CSADQ9Y600 493 aa24.23■■□□□ 1.47
HMGCS1-206ENST00000511774 IRF6O14896 467 aa24.22■■□□□ 1.47
HMGCS1-206ENST00000511774 UBE2Q1Q7Z7E8 422 aa24.22■■□□□ 1.47
HMGCS1-206ENST00000511774 PUS3Q9BZE2 481 aaKnown RBP24.22■■□□□ 1.47
HMGCS1-206ENST00000511774 PRO3102Q9H379 93 aa24.22■■□□□ 1.47
HMGCS1-206ENST00000511774 BEND3Q5T5X7 828 aa24.21■■□□□ 1.47
HMGCS1-206ENST00000511774 CETPP11597 493 aa24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 HIBADHP31937 336 aaKnown RBP24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 C17orf99Q6UX52 265 aa24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 ERO1BQ86YB8 467 aa24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 WWC1Q8IX03 1113 aa24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 TRIM47Q96LD4 638 aa24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 CNNM1Q9NRU3 951 aa24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 IQSEC3Q9UPP2 1182 aaPredicted RBP24.2■■□□□ 1.46
HMGCS1-206ENST00000511774 DPF3Q92784 378 aa24.19■■□□□ 1.46
HMGCS1-206ENST00000511774 WRNIP1Q96S55 665 aa24.19■■□□□ 1.46
HMGCS1-206ENST00000511774 CPA4Q9UI42 421 aa24.19■■□□□ 1.46
HMGCS1-206ENST00000511774 ADGRA2Q96PE1 1338 aa24.18■■□□□ 1.46
HMGCS1-206ENST00000511774 UBE4AQ14139 1066 aa24.18■■□□□ 1.46
HMGCS1-206ENST00000511774 KIF22Q14807 665 aa24.18■■□□□ 1.46
HMGCS1-206ENST00000511774 CCDC57Q2TAC2 916 aa24.18■■□□□ 1.46
HMGCS1-206ENST00000511774 ZCCHC17Q9NP64 241 aaKnown RBP24.18■■□□□ 1.46
HMGCS1-206ENST00000511774 TNNI2P48788 182 aa24.17■■□□□ 1.46
HMGCS1-206ENST00000511774 PPIL2Q13356 520 aa24.17■■□□□ 1.46
HMGCS1-206ENST00000511774 SNAPC2Q13487 334 aa24.17■■□□□ 1.46
HMGCS1-206ENST00000511774 SRRDQ9UH36 339 aa24.17■■□□□ 1.46
HMGCS1-206ENST00000511774 VAMP4O75379 141 aa24.16■■□□□ 1.46
HMGCS1-206ENST00000511774 OSBPP22059 807 aa24.16■■□□□ 1.46
HMGCS1-206ENST00000511774 PSMC4P43686 418 aa24.16■■□□□ 1.46
HMGCS1-206ENST00000511774 CCDC184Q52MB2 194 aa24.16■■□□□ 1.46
HMGCS1-206ENST00000511774 TAF7LQ5H9L4 462 aa24.16■■□□□ 1.46
HMGCS1-206ENST00000511774 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 GNRH1P01148 92 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 PRMT2P55345 433 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 CHAF1AQ13111 956 aaPredicted RBP24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 CCDC27Q2M243 656 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 FBXO33Q7Z6M2 555 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 KAZALD1Q96I82 304 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 MGAMO43451 1857 aa24.15■■□□□ 1.46
HMGCS1-206ENST00000511774 GRM8O00222 908 aa24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 CCL5P13501 91 aa24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 INPP5BP32019 993 aa24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 GJA8P48165 433 aa24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 MOGSQ13724 837 aa24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 RIPOR2Q9Y4F9 1068 aa24.14■■□□□ 1.45
HMGCS1-206ENST00000511774 GRK4P32298 578 aa24.13■■□□□ 1.45
HMGCS1-206ENST00000511774 APOBEC3HQ6NTF7 200 aaKnown RBP24.13■■□□□ 1.45
HMGCS1-206ENST00000511774 SOX1O00570 391 aaPredicted RBP24.12■■□□□ 1.45
HMGCS1-206ENST00000511774 GJB1P08034 283 aa24.12■■□□□ 1.45
HMGCS1-206ENST00000511774 HDLBPQ00341 1268 aaKnown RBP24.12■■□□□ 1.45
HMGCS1-206ENST00000511774 MIGA2Q7L4E1 593 aa24.12■■□□□ 1.45
HMGCS1-206ENST00000511774 ALPK3Q96L96 1907 aa24.12■■□□□ 1.45
HMGCS1-206ENST00000511774 IL16Q14005 1332 aa24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 PDHXO00330 501 aa24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 DLL1O00548 723 aa24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 WDHD1O75717 1129 aaPredicted RBP24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 FAM83AQ86UY5 434 aa24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 TEKT1Q969V4 418 aa24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 SUCLG2Q96I99 432 aa24.11■■□□□ 1.45
HMGCS1-206ENST00000511774 ZDHHC15Q96MV8 337 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms