RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 CD151P48509 253 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 GNG11P61952 73 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 FILIP1LQ4L180 1135 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 THEMIS2Q5TEJ8 643 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 RINLQ6ZS11 566 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 TTLL7Q6ZT98 887 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 LEO1Q8WVC0 666 aaPredicted RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 MKL1Q969V6 931 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 MMTAG2Q9BU76 263 aaKnown RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 LSG1Q9H089 658 aaKnown RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 GBP3Q9H0R5 595 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 CENPHQ9H3R5 247 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 G3BP2Q9UN86 482 aaKnown RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 SETD1BQ9UPS6 1966 aaKnown RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 ADCY9O60503 1353 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 PES1O00541 588 aaKnown RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 MEFVO15553 781 aaPredicted RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 ZSCAN12O43309 604 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 PYGBP11216 843 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 ARHGAP25P42331 645 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 PTH1RQ03431 593 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 SNCBQ16143 134 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 CCDC40Q4G0X9 1142 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 AMOTQ4VCS5 1084 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 LARP1BQ659C4 914 aaKnown RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 SRGAP1Q7Z6B7 1085 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 MAGEC3Q8TD91 643 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 EZH1Q92800 747 aaPredicted RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 SCAND2PQ9GZW5 306 aaPredicted RBP8.35□□□□□ -1.07
CPNE4-208ENST00000511604 MIS18AQ9NYP9 233 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 TPCN1Q9ULQ1 816 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 FANCAO15360 1455 aa8.35□□□□□ -1.07
CPNE4-208ENST00000511604 PPFIA3O75145 1194 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 RPSAP08865 295 aaKnown RBP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 CDR1P51861 262 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 VSNL1P62760 191 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 LAMB3Q13751 1172 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 LARP1Q6PKG0 1096 aaKnown RBP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 B4GALNT4Q76KP1 1039 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 SPATA21Q7Z572 469 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 RBM12BQ8IXT5 1001 aaKnown RBP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 AOPEPQ8N6M6 819 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 SPATA32Q96LK8 384 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 MAF1Q9H063 256 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 GOLPH3LQ9H4A5 285 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 VIPAS39Q9H9C1 493 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 SPHKAPQ2M3C7 1700 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 SSH2Q76I76 1423 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 ABCA6Q8N139 1617 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 EVC2Q86UK5 1308 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 H7C1W4 665 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 EIF3HO15372 352 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 ZSCAN9O15535 394 aaPredicted RBP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 NFE2L2Q16236 605 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 KIF4BQ2VIQ3 1234 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 TBC1D5Q92609 795 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 PLEKHG4BQ96PX9 1271 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 TSPAN18Q96SJ8 248 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 XPO4Q9C0E2 1151 aaKnown RBP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 EHD4Q9H223 541 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 RABEP2Q9H5N1 569 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 VCPKMTQ9H867 229 aa8.34□□□□□ -1.07
CPNE4-208ENST00000511604 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPNE4-208ENST00000511604 PLCH2O75038 1416 aa8.34□□□□□ -1.08
CPNE4-208ENST00000511604 A0A1W2PP64 1363 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 KIAA0232Q92628 1395 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 ZEB2O60315 1214 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 CUTAO60888 179 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 PDHBP11177 359 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 FOSBP53539 338 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 STK3Q13188 491 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 PLCB4Q15147 1175 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 CAPRIN2Q6IMN6 1127 aaKnown RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 FAM228AQ86W67 206 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 MYLK4Q86YV6 388 aaPredicted RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 CCDC50Q8IVM0 306 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 B4GALNT2Q8NHY0 566 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 FAM76AQ8TAV0 307 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 ARHGEF1Q92888 912 aaKnown RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 SLC40A1Q9NP59 571 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 RTEL1Q9NZ71 1219 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 FESP07332 822 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 USP4Q13107 963 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 E2F5Q15329 346 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 YTHDF3Q7Z739 585 aaKnown RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 TMTC2Q8N394 836 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 JAKMIP1Q96N16 626 aaKnown RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 ZNF396Q96N95 335 aaPredicted RBP8.33□□□□□ -1.08
CPNE4-208ENST00000511604 RMI1Q9H9A7 625 aa8.33□□□□□ -1.08
CPNE4-208ENST00000511604 SLC39A2Q9NP94 309 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms