RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 KIF3AQ9Y496 699 aa14.75□□□□□ -0.05
LIN54-210ENST00000510877 ATP10DQ9P241 1426 aa14.75□□□□□ -0.05
LIN54-210ENST00000510877 ZFYP08048 801 aaPredicted RBP14.75□□□□□ -0.05
LIN54-210ENST00000510877 BTDP43251 543 aa14.75□□□□□ -0.05
LIN54-210ENST00000510877 CTCFP49711 727 aaPredicted RBP14.75□□□□□ -0.05
LIN54-210ENST00000510877 SPATA5Q8NB90 893 aa14.75□□□□□ -0.05
LIN54-210ENST00000510877 SEMA3EO15041 775 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 UBXN2AP68543 259 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 IMMTQ16891 758 aaKnown RBP14.74□□□□□ -0.05
LIN54-210ENST00000510877 BEND3Q5T5X7 828 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 ATP8B2P98198 1209 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 TRIM29Q14134 588 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 RASA3Q14644 834 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 DPP9Q86TI2 863 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 CAPNS2Q96L46 248 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 ELP3Q9H9T3 547 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 TRIM75PA6NK02 468 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 PTGER2P43116 358 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
LIN54-210ENST00000510877 KDM6AO15550 1401 aaPredicted RBP14.74□□□□□ -0.05
LIN54-210ENST00000510877 GSE1Q14687 1217 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 LRRC24Q50LG9 513 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 ANKRD13AQ8IZ07 590 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 UBE2Q2Q8WVN8 375 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 ZNF76P36508 570 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 ZC3H4Q9UPT8 1303 aaKnown RBP14.73□□□□□ -0.05
LIN54-210ENST00000510877 H7C1W4 665 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 TRAF1Q13077 416 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 DPF2Q92785 391 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 CUL5Q93034 780 aa14.73□□□□□ -0.05
LIN54-210ENST00000510877 PUS3Q9BZE2 481 aaKnown RBP14.73□□□□□ -0.05
LIN54-210ENST00000510877 TMEM132AQ24JP5 1023 aa14.72□□□□□ -0.05
LIN54-210ENST00000510877 DEFB129Q9H1M3 183 aa14.72□□□□□ -0.05
LIN54-210ENST00000510877 GPRC5DQ9NZD1 345 aa14.72□□□□□ -0.05
LIN54-210ENST00000510877 CCDC69A6NI79 296 aa14.72□□□□□ -0.05
LIN54-210ENST00000510877 SLC10A5Q5PT55 438 aa14.72□□□□□ -0.05
LIN54-210ENST00000510877 CCDC102BQ68D86 513 aa14.72□□□□□ -0.05
LIN54-210ENST00000510877 SLIT3O75094 1523 aa14.71□□□□□ -0.05
LIN54-210ENST00000510877 CACNB3P54284 484 aa14.71□□□□□ -0.05
LIN54-210ENST00000510877 SEC63Q9UGP8 760 aaKnown RBP14.71□□□□□ -0.05
LIN54-210ENST00000510877 SHPRHQ149N8 1683 aa14.71□□□□□ -0.05
LIN54-210ENST00000510877 TNPO2O14787 897 aaKnown RBP14.71□□□□□ -0.05
LIN54-210ENST00000510877 REC8O95072 547 aa14.71□□□□□ -0.05
LIN54-210ENST00000510877 XBP1P17861 261 aa14.71□□□□□ -0.05
LIN54-210ENST00000510877 ZHX2Q9Y6X8 837 aa14.71□□□□□ -0.05
LIN54-210ENST00000510877 CCL15-CCL14A0A0B4J2E2 113 aa14.71□□□□□ -0.06
LIN54-210ENST00000510877 CCL15Q16663 113 aa14.71□□□□□ -0.06
LIN54-210ENST00000510877 RGMBQ6NW40 437 aa14.71□□□□□ -0.06
LIN54-210ENST00000510877 IFT172Q9UG01 1749 aa14.71□□□□□ -0.06
LIN54-210ENST00000510877 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 GOLGA6L3A6NEY3 463 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 CA12O43570 354 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 ZBED4O75132 1171 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 TBC1D9Q6ZT07 1266 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 ZC3H15Q8WU90 426 aaKnown RBP14.7□□□□□ -0.06
LIN54-210ENST00000510877 PIBF1Q8WXW3 757 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 ZNF213O14771 459 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 MAP3K9P80192 1104 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 SNAPC2Q13487 334 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 ZRSR1Q15695 479 aaKnown RBP14.7□□□□□ -0.06
LIN54-210ENST00000510877 FASTKD5Q7L8L6 764 aaKnown RBP14.7□□□□□ -0.06
LIN54-210ENST00000510877 CPXCR1Q8N123 301 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 SCLT1Q96NL6 688 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 PAG1Q9NWQ8 432 aa14.7□□□□□ -0.06
LIN54-210ENST00000510877 MX1P20591 662 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 HOXA10P31260 410 aaPredicted RBP14.69□□□□□ -0.06
LIN54-210ENST00000510877 DBNDD2Q9BQY9 259 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 SMARCA5O60264 1052 aaPredicted RBP14.69□□□□□ -0.06
LIN54-210ENST00000510877 GNAT2P19087 354 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 MMP14P50281 582 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 CYP4F22Q6NT55 531 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 DGKZQ13574 1117 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 EFCC1Q9HA90 598 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 ADCY9O60503 1353 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 SPDYE4A6NLX3 237 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 VAT1LQ9HCJ6 419 aa14.69□□□□□ -0.06
LIN54-210ENST00000510877 SCAF8Q9UPN6 1271 aaKnown RBP14.69□□□□□ -0.06
LIN54-210ENST00000510877 CERKLQ49MI3 558 aaPredicted RBP14.68□□□□□ -0.06
LIN54-210ENST00000510877 TPRNQ4KMQ1 711 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 KAT14Q9H8E8 782 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 TRIM17Q9Y577 477 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 USP14P54578 494 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 TNNI3KQ59H18 835 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 CTCFLQ8NI51 663 aaPredicted RBP14.68□□□□□ -0.06
LIN54-210ENST00000510877 FPGT-TNNI3KV9GXZ4 949 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 MANSC4A6NHS7 340 aaPredicted RBP14.68□□□□□ -0.06
LIN54-210ENST00000510877 SNAP23O00161 211 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 CETPP11597 493 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 DIXDC1Q155Q3 683 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 CWC27Q6UX04 472 aaKnown RBP14.68□□□□□ -0.06
LIN54-210ENST00000510877 FAM184AQ8NB25 1140 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 UBN2Q6ZU65 1347 aa14.68□□□□□ -0.06
LIN54-210ENST00000510877 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 EXOC6Q8TAG9 804 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 DPF3Q92784 378 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 SLKQ9H2G2 1235 aaPredicted RBP14.67□□□□□ -0.06
LIN54-210ENST00000510877 DHX36Q9H2U1 1008 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms