RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 CHAF1AQ13111 956 aaPredicted RBP27.33■■□□□ 1.97
SPOCK1-209ENST00000510689 RASA3Q14644 834 aa27.33■■□□□ 1.97
SPOCK1-209ENST00000510689 COPRSQ9NQ92 184 aa27.33■■□□□ 1.97
SPOCK1-209ENST00000510689 ANGEL1Q9UNK9 670 aaKnown RBP27.33■■□□□ 1.97
SPOCK1-209ENST00000510689 DIEXFQ68CQ4 756 aaKnown RBP27.32■■□□□ 1.96
SPOCK1-209ENST00000510689 TEPSINQ96N21 525 aa27.32■■□□□ 1.96
SPOCK1-209ENST00000510689 SIL1Q9H173 461 aa27.32■■□□□ 1.96
SPOCK1-209ENST00000510689 VEZTQ9HBM0 779 aa27.32■■□□□ 1.96
SPOCK1-209ENST00000510689 PA2G4Q9UQ80 394 aaKnown RBP27.32■■□□□ 1.96
SPOCK1-209ENST00000510689 HDAC5Q9UQL6 1122 aa27.32■■□□□ 1.96
SPOCK1-209ENST00000510689 ZBTB22O15209 634 aa27.31■■□□□ 1.96
SPOCK1-209ENST00000510689 SLC5A1P13866 664 aa27.31■■□□□ 1.96
SPOCK1-209ENST00000510689 MTX1Q13505 466 aa27.31■■□□□ 1.96
SPOCK1-209ENST00000510689 SUGT1Q9Y2Z0 365 aa27.31■■□□□ 1.96
SPOCK1-209ENST00000510689 USP2O75604 605 aaPredicted RBP27.3■■□□□ 1.96
SPOCK1-209ENST00000510689 SUPT20HL1Q3ZLR7 823 aa27.3■■□□□ 1.96
SPOCK1-209ENST00000510689 SPRYD7Q5W111 196 aa27.3■■□□□ 1.96
SPOCK1-209ENST00000510689 ATF7IPQ6VMQ6 1270 aa27.3■■□□□ 1.96
SPOCK1-209ENST00000510689 UNCXA6NJT0 531 aa27.29■■□□□ 1.96
SPOCK1-209ENST00000510689 CDAN1Q8IWY9 1227 aa27.29■■□□□ 1.96
SPOCK1-209ENST00000510689 CLMNQ96JQ2 1002 aa27.29■■□□□ 1.96
SPOCK1-209ENST00000510689 MCOLN1Q9GZU1 580 aa27.29■■□□□ 1.96
SPOCK1-209ENST00000510689 CEP126Q9P2H0 1117 aa27.29■■□□□ 1.96
SPOCK1-209ENST00000510689 IPO8O15397 1037 aaKnown RBP27.28■■□□□ 1.96
SPOCK1-209ENST00000510689 FRAT2O75474 233 aaPredicted RBP27.28■■□□□ 1.96
SPOCK1-209ENST00000510689 GNAI3P08754 354 aa27.28■■□□□ 1.96
SPOCK1-209ENST00000510689 IL15P40933 162 aaPredicted RBP27.28■■□□□ 1.96
SPOCK1-209ENST00000510689 ATP2B3Q16720 1220 aa27.28■■□□□ 1.96
SPOCK1-209ENST00000510689 ZDHHC15Q96MV8 337 aa27.28■■□□□ 1.96
SPOCK1-209ENST00000510689 PPP1R12BO60237 982 aaPredicted RBP27.27■■□□□ 1.96
SPOCK1-209ENST00000510689 TNFAIP1Q13829 316 aa27.27■■□□□ 1.96
SPOCK1-209ENST00000510689 APOBEC3HQ6NTF7 200 aaKnown RBP27.27■■□□□ 1.96
SPOCK1-209ENST00000510689 TEKT1Q969V4 418 aa27.26■■□□□ 1.95
SPOCK1-209ENST00000510689 HNRNPUQ00839 825 aaKnown RBP eCLIP27.25■■□□□ 1.95
SPOCK1-209ENST00000510689 MKRN3Q13064 507 aaKnown RBP27.25■■□□□ 1.95
SPOCK1-209ENST00000510689 HHIPL2Q6UWX4 724 aa27.25■■□□□ 1.95
SPOCK1-209ENST00000510689 WDR66Q8TBY9 1149 aa27.25■■□□□ 1.95
SPOCK1-209ENST00000510689 SLC10A4Q96EP9 437 aa27.25■■□□□ 1.95
SPOCK1-209ENST00000510689 CFHR5Q9BXR6 569 aa27.25■■□□□ 1.95
SPOCK1-209ENST00000510689 DGKZQ13574 1117 aa27.24■■□□□ 1.95
SPOCK1-209ENST00000510689 TMEM39BQ9GZU3 492 aa27.24■■□□□ 1.95
SPOCK1-209ENST00000510689 TCP10L2B9ZVM9 353 aa27.23■■□□□ 1.95
SPOCK1-209ENST00000510689 PHKA1P46020 1223 aa27.23■■□□□ 1.95
SPOCK1-209ENST00000510689 FKBP1CQ5VVH2 108 aa27.23■■□□□ 1.95
SPOCK1-209ENST00000510689 FRAT1Q92837 279 aaPredicted RBP27.23■■□□□ 1.95
SPOCK1-209ENST00000510689 WNK4Q96J92 1243 aa27.23■■□□□ 1.95
SPOCK1-209ENST00000510689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.23■■□□□ 1.95
SPOCK1-209ENST00000510689 MAST3O60307 1309 aa27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 MYH2Q9UKX2 1941 aa27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 SRGAP3O43295 1099 aa27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 ZBTB48P10074 688 aaPredicted RBP27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 ADORA1P30542 326 aa27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 GJA5P36382 358 aa27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 NOM1Q5C9Z4 860 aaKnown RBP27.22■■□□□ 1.95
SPOCK1-209ENST00000510689 SALL1Q9NSC2 1324 aa27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 TBC1D8O95759 1140 aa27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 IREB2P48200 963 aaKnown RBP27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 CACNB3P54284 484 aa27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 SREBF2Q12772 1141 aa27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 CLUAP1Q96AJ1 413 aa27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 R3HDMLQ9H3Y0 253 aa27.21■■□□□ 1.95
SPOCK1-209ENST00000510689 SEMA3EO15041 775 aa27.2■■□□□ 1.94
SPOCK1-209ENST00000510689 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.2■■□□□ 1.94
SPOCK1-209ENST00000510689 FAM83AQ86UY5 434 aa27.2■■□□□ 1.94
SPOCK1-209ENST00000510689 ANKRD13AQ8IZ07 590 aa27.2■■□□□ 1.94
SPOCK1-209ENST00000510689 PRDX5P30044 214 aa27.19■■□□□ 1.94
SPOCK1-209ENST00000510689 TNNI2P48788 182 aa27.19■■□□□ 1.94
SPOCK1-209ENST00000510689 TIMM10P62072 90 aa27.19■■□□□ 1.94
SPOCK1-209ENST00000510689 CCDC102BQ68D86 513 aa27.19■■□□□ 1.94
SPOCK1-209ENST00000510689 TMEM57Q8N5G2 664 aa27.19■■□□□ 1.94
SPOCK1-209ENST00000510689 PNMA6EA0A0J9YXQ4 647 aa27.18■■□□□ 1.94
SPOCK1-209ENST00000510689 MANSC4A6NHS7 340 aaPredicted RBP27.18■■□□□ 1.94
SPOCK1-209ENST00000510689 GNAI2P04899 355 aa27.18■■□□□ 1.94
SPOCK1-209ENST00000510689 INHBEP58166 350 aa27.18■■□□□ 1.94
SPOCK1-209ENST00000510689 ZKSCAN2Q63HK3 967 aa27.18■■□□□ 1.94
SPOCK1-209ENST00000510689 DAGLAQ9Y4D2 1042 aa27.18■■□□□ 1.94
SPOCK1-209ENST00000510689 TFCP2Q12800 502 aa27.17■■□□□ 1.94
SPOCK1-209ENST00000510689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.17■■□□□ 1.94
SPOCK1-209ENST00000510689 ZNF296Q8WUU4 475 aaPredicted RBP27.17■■□□□ 1.94
SPOCK1-209ENST00000510689 GNL3LQ9NVN8 582 aaKnown RBP27.17■■□□□ 1.94
SPOCK1-209ENST00000510689 DENND2AQ9ULE3 1009 aa27.17■■□□□ 1.94
SPOCK1-209ENST00000510689 TESPA1A2RU30 521 aaPredicted RBP27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 RGS19P49795 217 aa27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 DIXDC1Q155Q3 683 aa27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 IFNL1Q8IU54 200 aa27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 RPAP1Q9BWH6 1393 aaPredicted RBP27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 PDS5AQ29RF7 1337 aaKnown RBP27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 ZBED9Q6R2W3 1325 aa27.16■■□□□ 1.94
SPOCK1-209ENST00000510689 A0A1B0GUL7 405 aa27.15■■□□□ 1.94
SPOCK1-209ENST00000510689 CCDC85CA6NKD9 419 aa27.15■■□□□ 1.94
SPOCK1-209ENST00000510689 GPR25O00155 361 aa27.15■■□□□ 1.94
SPOCK1-209ENST00000510689 IGF2BP3O00425 579 aaKnown RBP eCLIP27.15■■□□□ 1.94
SPOCK1-209ENST00000510689 CTU1Q7Z7A3 348 aaKnown RBP27.15■■□□□ 1.94
SPOCK1-209ENST00000510689 AK9Q5TCS8 1911 aa27.15■■□□□ 1.94
SPOCK1-209ENST00000510689 RASGRF1Q13972 1273 aa27.14■■□□□ 1.94
SPOCK1-209ENST00000510689 CDC42EP5Q6NZY7 148 aa27.14■■□□□ 1.94
SPOCK1-209ENST00000510689 XAGE2Q96GT9 111 aa27.14■■□□□ 1.94
SPOCK1-209ENST00000510689 MS4A4AQ96JQ5 239 aa27.14■■□□□ 1.94
SPOCK1-209ENST00000510689 LDHBP07195 334 aaKnown RBP27.13■■□□□ 1.93
SPOCK1-209ENST00000510689 RLBP1P12271 317 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms