RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 HHIPL2Q6UWX4 724 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 ERC1Q8IUD2 1116 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 HHIPL1Q96JK4 782 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 ZNF512BQ96KM6 892 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 DBNDD2Q9BQY9 259 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 HMG20BQ9P0W2 317 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 DBNLQ9UJU6 430 aaKnown RBP14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 PRDX5P30044 214 aa14.47□□□□□ -0.09
HMGXB3-203ENST00000510472 VEGFBP49765 207 aa14.47□□□□□ -0.09
HMGXB3-203ENST00000510472 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
HMGXB3-203ENST00000510472 PRAMEF18Q5VWM3 479 aa14.47□□□□□ -0.09
HMGXB3-203ENST00000510472 APOBEC3FQ8IUX4 373 aaKnown RBP14.47□□□□□ -0.09
HMGXB3-203ENST00000510472 RHPN1Q8TCX5 695 aa14.47□□□□□ -0.09
HMGXB3-203ENST00000510472 RAB11FIP3O75154 756 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 MCAMP43121 646 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 RBM5P52756 815 aaKnown RBP eCLIP14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 SPATA5Q8NB90 893 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 TEKT1Q969V4 418 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 DEFB129Q9H1M3 183 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 TDRD3Q9H7E2 651 aaKnown RBP14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 ZNF408Q9H9D4 720 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 GBA2Q9HCG7 927 aaPredicted RBP14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 TLR7Q9NYK1 1049 aaKnown RBP14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 ZNF70Q9UC06 446 aaPredicted RBP14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 ABT1Q9ULW3 272 aaKnown RBP14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 PCDHB15Q9Y5E8 787 aa14.46□□□□□ -0.09
HMGXB3-203ENST00000510472 MAST3O60307 1309 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 CLRN2A0PK11 232 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 MYO1BO43795 1136 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 LDHBP07195 334 aaKnown RBP14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 UQCRFS1P1P0C7P4 283 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 GORABQ5T7V8 394 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 PI16Q6UXB8 463 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 ZNF384Q8TF68 577 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 FAM163AQ96GL9 167 aaPredicted RBP14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 CCDC8Q9H0W5 538 aaPredicted RBP14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 PPP2R3BQ9Y5P8 575 aa14.45□□□□□ -0.1
HMGXB3-203ENST00000510472 FKBP1BP68106 108 aa14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 DIXDC1Q155Q3 683 aa14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 ZGPATQ8N5A5 531 aaKnown RBP14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 C2orf69Q8N8R5 385 aa14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 KIF1BPQ96EK5 621 aa14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 DAGLAQ9Y4D2 1042 aa14.44□□□□□ -0.1
HMGXB3-203ENST00000510472 RASA3Q14644 834 aa14.43□□□□□ -0.1
HMGXB3-203ENST00000510472 CCDC158Q5M9N0 1113 aa14.43□□□□□ -0.1
HMGXB3-203ENST00000510472 FKBP1CQ5VVH2 108 aa14.43□□□□□ -0.1
HMGXB3-203ENST00000510472 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
HMGXB3-203ENST00000510472 IL1RAPL2Q9NP60 686 aa14.43□□□□□ -0.1
HMGXB3-203ENST00000510472 POLR2AP24928 1970 aaKnown RBP14.43□□□□□ -0.1
HMGXB3-203ENST00000510472 GAKO14976 1311 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 WDR33Q9C0J8 1336 aaKnown RBP14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 ARAP2Q8WZ64 1704 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 HUNKP57058 714 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 SPTY2D1Q68D10 685 aaPredicted RBP14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 CYP4F22Q6NT55 531 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 TBC1D9Q6ZT07 1266 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 AACSQ86V21 672 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 TEPSINQ96N21 525 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 ABCF2Q9UG63 623 aa14.42□□□□□ -0.1
HMGXB3-203ENST00000510472 PCNTO95613 3336 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 FAM155AB1AL88 458 aaPredicted RBP14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 CYP2E1P05181 493 aaPredicted RBP14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 MECOMQ03112 1051 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 TNFAIP1Q13829 316 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 MAP3K11Q16584 847 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 TTC39AQ5SRH9 613 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 LDLRAD1Q5T700 205 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 CDC42EP5Q6NZY7 148 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 MOB2Q70IA6 237 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 CLASRPQ8N2M8 674 aaKnown RBP14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 NSUN4Q96CB9 384 aaKnown RBP14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 VEZTQ9HBM0 779 aa14.41□□□□□ -0.1
HMGXB3-203ENST00000510472 IGSF3O75054 1194 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 ECE1P42892 770 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 ZAP70P43403 619 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 CACNB3P54284 484 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 COL13A1Q5TAT6 717 aaPredicted RBP14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 RGMBQ6NW40 437 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 ERICH6Q7L0X2 663 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 FAM83AQ86UY5 434 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 TNS4Q8IZW8 715 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 TRPM7Q96QT4 1865 aa14.4□□□□□ -0.1
HMGXB3-203ENST00000510472 GPR75-ASB3A0A0A6YYF3 556 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 UBE2Q2LH0YL09 131 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 APBB1O00213 710 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 NF2P35240 595 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 MAP2K2P36507 400 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 SSC5DA1L4H1 1573 aa14.39□□□□□ -0.11
HMGXB3-203ENST00000510472 USP2O75604 605 aaPredicted RBP14.38□□□□□ -0.11
HMGXB3-203ENST00000510472 AAMPQ13685 434 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms