RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 PIP4P2Q8N4L2 257 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 PSMD14O00487 310 aa16.73■□□□□ 0.27
CYSTM1-204ENST00000509789 RNF113AO15541 343 aaKnown RBP16.73■□□□□ 0.27
CYSTM1-204ENST00000509789 TMED8Q6PL24 325 aaPredicted RBP16.73■□□□□ 0.27
CYSTM1-204ENST00000509789 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
CYSTM1-204ENST00000509789 MYO3BQ8WXR4 1341 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 MYH13Q9UKX3 1938 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 COL4A5P29400 1685 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 PDE6AP16499 860 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 CHMLP26374 656 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 PRDX5P30044 214 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 GSTO1P78417 241 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 CERS5Q8N5B7 392 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 MXD3Q9BW11 206 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
CYSTM1-204ENST00000509789 LDHCP07864 332 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 CYP7A1P22680 504 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 ADD2P35612 726 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 MECOMQ03112 1051 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 UBE3CQ15386 1083 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 SLF2Q8IX21 1173 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
CYSTM1-204ENST00000509789 MAST3O60307 1309 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 SCN9AQ15858 1988 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 GRIK5Q16478 980 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 AGBL3Q8NEM8 1001 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 TTF2Q9UNY4 1162 aaKnown RBP16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 GJA3Q9Y6H8 435 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
CYSTM1-204ENST00000509789 SBF1O95248 1867 aa16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 F8W031 263 aaPredicted RBP16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 RPS12P25398 132 aaKnown RBP16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 NMIQ13287 307 aaPredicted RBP16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 GOLGB1Q14789 3259 aaKnown RBP16.69■□□□□ 0.26
CYSTM1-204ENST00000509789 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 TCRBV5S4A2TA0A5A2 114 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 OGFOD1Q8N543 542 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 APPBP2Q92624 585 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 GMLQ99445 158 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 MRIQ9BWK5 157 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
CYSTM1-204ENST00000509789 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 MMP14P50281 582 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 MCMDC2Q4G0Z9 681 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 GPC2Q8N158 579 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 TEKT1Q969V4 418 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
CYSTM1-204ENST00000509789 CHGBP05060 677 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 SCNN1DP51172 638 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 DIXDC1Q155Q3 683 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 DPF2Q92785 391 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 OSBP2Q969R2 916 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 ESYT1Q9BSJ8 1104 aa16.66■□□□□ 0.26
CYSTM1-204ENST00000509789 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 BAG3O95817 575 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 HHIPL2Q6UWX4 724 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 SERPINA10Q9UK55 444 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 MROH7-TTC4A0A0A0MT08 1334 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 RAD50Q92878 1312 aa16.65■□□□□ 0.26
CYSTM1-204ENST00000509789 PSME4Q14997 1843 aa16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 DOCK2Q92608 1830 aa16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 SGSM2O43147 1006 aa16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 CRKP46108 304 aa16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 RBM5P52756 815 aaKnown RBP eCLIP16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 MIGA1Q8NAN2 632 aa16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 SEC62Q99442 399 aaKnown RBP16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 PUS7LQ9H0K6 701 aaKnown RBP16.64■□□□□ 0.25
CYSTM1-204ENST00000509789 GPR75-ASB3A0A0A6YYF3 556 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 H7C1D1 291 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 M0R2C6 588 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 DDNO94850 711 aaPredicted RBP16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 MBD4O95243 580 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms