RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 IQSEC3Q9UPP2 1182 aaPredicted RBP18.25■□□□□ 0.51
HMGCL-208ENST00000509389 LAMB1P07942 1786 aa18.24■□□□□ 0.51
HMGCL-208ENST00000509389 MANSC4A6NHS7 340 aaPredicted RBP18.24■□□□□ 0.51
HMGCL-208ENST00000509389 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
HMGCL-208ENST00000509389 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
HMGCL-208ENST00000509389 PDE8BO95263 885 aa18.24■□□□□ 0.51
HMGCL-208ENST00000509389 GRIK5Q16478 980 aa18.24■□□□□ 0.51
HMGCL-208ENST00000509389 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
HMGCL-208ENST00000509389 DZIP1LQ8IYY4 767 aaKnown RBP18.24■□□□□ 0.51
HMGCL-208ENST00000509389 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
HMGCL-208ENST00000509389 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
HMGCL-208ENST00000509389 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
HMGCL-208ENST00000509389 CRKP46108 304 aa18.23■□□□□ 0.51
HMGCL-208ENST00000509389 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
HMGCL-208ENST00000509389 INHBEP58166 350 aa18.23■□□□□ 0.51
HMGCL-208ENST00000509389 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
HMGCL-208ENST00000509389 CAVIN4Q5BKX8 364 aa18.23■□□□□ 0.51
HMGCL-208ENST00000509389 ALDH1A1P00352 501 aa18.22■□□□□ 0.51
HMGCL-208ENST00000509389 SOX10P56693 466 aa18.22■□□□□ 0.51
HMGCL-208ENST00000509389 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
HMGCL-208ENST00000509389 PKN2Q16513 984 aaKnown RBP18.22■□□□□ 0.51
HMGCL-208ENST00000509389 HPS5Q9UPZ3 1129 aa18.22■□□□□ 0.51
HMGCL-208ENST00000509389 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
HMGCL-208ENST00000509389 OTOFQ9HC10 1997 aa18.22■□□□□ 0.51
HMGCL-208ENST00000509389 FKTNO75072 461 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
HMGCL-208ENST00000509389 BCAMP50895 628 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 IFNL1Q8IU54 200 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 TBC1D22AQ8WUA7 517 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 TEPSINQ96N21 525 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
HMGCL-208ENST00000509389 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
HMGCL-208ENST00000509389 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
HMGCL-208ENST00000509389 FGFR2P21802 821 aa18.2■□□□□ 0.5
HMGCL-208ENST00000509389 GJA5P36382 358 aa18.2■□□□□ 0.5
HMGCL-208ENST00000509389 RFX5P48382 616 aaPredicted RBP18.2■□□□□ 0.5
HMGCL-208ENST00000509389 CDAN1Q8IWY9 1227 aa18.2■□□□□ 0.5
HMGCL-208ENST00000509389 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
HMGCL-208ENST00000509389 PUM3Q15397 648 aaKnown RBP18.19■□□□□ 0.5
HMGCL-208ENST00000509389 EYA2O00167 538 aa18.18■□□□□ 0.5
HMGCL-208ENST00000509389 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
HMGCL-208ENST00000509389 TNNI2P48788 182 aa18.18■□□□□ 0.5
HMGCL-208ENST00000509389 TMEM39BQ9GZU3 492 aa18.18■□□□□ 0.5
HMGCL-208ENST00000509389 PDE4DIPQ5VU43 2346 aa18.18■□□□□ 0.5
HMGCL-208ENST00000509389 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-208ENST00000509389 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
HMGCL-208ENST00000509389 FBXO46Q6PJ61 603 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-208ENST00000509389 ARHGAP45Q92619 1136 aa18.17■□□□□ 0.5
HMGCL-208ENST00000509389 TEKT1Q969V4 418 aa18.17■□□□□ 0.5
HMGCL-208ENST00000509389 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
HMGCL-208ENST00000509389 MYH13Q9UKX3 1938 aa18.17■□□□□ 0.5
HMGCL-208ENST00000509389 TNRC18O15417 2968 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-208ENST00000509389 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-208ENST00000509389 MRIQ9BWK5 157 aa18.17■□□□□ 0.5
HMGCL-208ENST00000509389 TESPA1A2RU30 521 aaPredicted RBP18.16■□□□□ 0.5
HMGCL-208ENST00000509389 SLC5A1P13866 664 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 CACNB3P54284 484 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 ATG9AQ7Z3C6 839 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 LPIN2Q92539 896 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 OPTNQ96CV9 577 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 ZDHHC15Q96MV8 337 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 PTPN18Q99952 460 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
HMGCL-208ENST00000509389 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
HMGCL-208ENST00000509389 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
HMGCL-208ENST00000509389 MAP3K9P80192 1104 aa18.15■□□□□ 0.5
HMGCL-208ENST00000509389 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
HMGCL-208ENST00000509389 OTUD7BQ6GQQ9 843 aa18.15■□□□□ 0.5
HMGCL-208ENST00000509389 MAST3O60307 1309 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 TRIM27P14373 513 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 CRHR2Q13324 411 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 VGLL4Q14135 290 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 APOBEC3HQ6NTF7 200 aaKnown RBP18.14■□□□□ 0.49
HMGCL-208ENST00000509389 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.14■□□□□ 0.49
HMGCL-208ENST00000509389 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 MS4A4AQ96JQ5 239 aa18.14■□□□□ 0.49
HMGCL-208ENST00000509389 CIAO1O76071 339 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 HHIPL2Q6UWX4 724 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 WDR66Q8TBY9 1149 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 API5Q9BZZ5 524 aaKnown RBP18.13■□□□□ 0.49
HMGCL-208ENST00000509389 SIL1Q9H173 461 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 TRIM17Q9Y577 477 aa18.13■□□□□ 0.49
HMGCL-208ENST00000509389 MS4A1P11836 297 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 RLBP1P12271 317 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 FKBP1CQ5VVH2 108 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 CSADQ9Y600 493 aa18.12■□□□□ 0.49
HMGCL-208ENST00000509389 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
HMGCL-208ENST00000509389 ATP2B3Q16720 1220 aa18.11■□□□□ 0.49
HMGCL-208ENST00000509389 OTOP1Q7RTM1 612 aa18.11■□□□□ 0.49
HMGCL-208ENST00000509389 BRI3BPQ8WY22 251 aa18.11■□□□□ 0.49
HMGCL-208ENST00000509389 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
HMGCL-208ENST00000509389 CEP126Q9P2H0 1117 aa18.11■□□□□ 0.49
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