RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 GSTO1P78417 241 aa17.99■□□□□ 0.47
RNF4-213ENST00000509388 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
RNF4-213ENST00000509388 RBM26Q5T8P6 1007 aaKnown RBP17.99■□□□□ 0.47
RNF4-213ENST00000509388 EDC3Q96F86 508 aaKnown RBP17.99■□□□□ 0.47
RNF4-213ENST00000509388 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
RNF4-213ENST00000509388 CHD4Q14839 1912 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 UTRNP46939 3433 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 LDHCP07864 332 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 GRIK5Q16478 980 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 ZSCAN25Q6NSZ9 544 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 RILPL2Q969X0 211 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 RRAGCQ9HB90 399 aa17.98■□□□□ 0.47
RNF4-213ENST00000509388 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
RNF4-213ENST00000509388 EPS15P42566 896 aa17.97■□□□□ 0.47
RNF4-213ENST00000509388 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
RNF4-213ENST00000509388 MECOMQ03112 1051 aa17.97■□□□□ 0.47
RNF4-213ENST00000509388 DLGAP5Q15398 846 aa17.97■□□□□ 0.47
RNF4-213ENST00000509388 NAA16Q6N069 864 aaPredicted RBP17.97■□□□□ 0.47
RNF4-213ENST00000509388 SKAP1Q86WV1 359 aa17.97■□□□□ 0.47
RNF4-213ENST00000509388 FSD1Q9BTV5 496 aa17.97■□□□□ 0.47
RNF4-213ENST00000509388 GPBP1L1Q9HC44 474 aaPredicted RBP17.97■□□□□ 0.47
RNF4-213ENST00000509388 ADARB2Q9NS39 739 aaKnown RBP17.97■□□□□ 0.47
RNF4-213ENST00000509388 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
RNF4-213ENST00000509388 EPHX2P34913 555 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 CRKP46108 304 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
RNF4-213ENST00000509388 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 SLC9C2Q5TAH2 1124 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 NOL10Q9BSC4 688 aaKnown RBP17.96■□□□□ 0.47
RNF4-213ENST00000509388 MRIQ9BWK5 157 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 SCN9AQ15858 1988 aa17.96■□□□□ 0.47
RNF4-213ENST00000509388 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
RNF4-213ENST00000509388 TBC1D10BQ4KMP7 808 aaPredicted RBP17.95■□□□□ 0.46
RNF4-213ENST00000509388 TMED8Q6PL24 325 aaPredicted RBP17.95■□□□□ 0.46
RNF4-213ENST00000509388 SAMD7Q7Z3H4 446 aa17.95■□□□□ 0.46
RNF4-213ENST00000509388 MAGEB6Q8N7X4 407 aa17.95■□□□□ 0.46
RNF4-213ENST00000509388 NSUN4Q96CB9 384 aaKnown RBP17.95■□□□□ 0.46
RNF4-213ENST00000509388 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
RNF4-213ENST00000509388 MYO1BO43795 1136 aa17.94■□□□□ 0.46
RNF4-213ENST00000509388 CYP7A1P22680 504 aa17.94■□□□□ 0.46
RNF4-213ENST00000509388 DIXDC1Q155Q3 683 aa17.94■□□□□ 0.46
RNF4-213ENST00000509388 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
RNF4-213ENST00000509388 EAPPQ56P03 285 aaPredicted RBP17.94■□□□□ 0.46
RNF4-213ENST00000509388 HHIPL2Q6UWX4 724 aa17.94■□□□□ 0.46
RNF4-213ENST00000509388 PNMA8AQ86V59 439 aaPredicted RBP17.94■□□□□ 0.46
RNF4-213ENST00000509388 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
RNF4-213ENST00000509388 USP50Q70EL3 339 aaPredicted RBP17.93■□□□□ 0.46
RNF4-213ENST00000509388 TAF1DQ9H5J8 278 aaPredicted RBP17.93■□□□□ 0.46
RNF4-213ENST00000509388 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
RNF4-213ENST00000509388 POTECB2RU33 542 aa17.92■□□□□ 0.46
RNF4-213ENST00000509388 BAG3O95817 575 aa17.92■□□□□ 0.46
RNF4-213ENST00000509388 PDE6AP16499 860 aa17.92■□□□□ 0.46
RNF4-213ENST00000509388 FAM163AQ96GL9 167 aaPredicted RBP17.92■□□□□ 0.46
RNF4-213ENST00000509388 ZDHHC15Q96MV8 337 aa17.92■□□□□ 0.46
RNF4-213ENST00000509388 CLEC11AQ9Y240 323 aa17.92■□□□□ 0.46
RNF4-213ENST00000509388 ZNF532Q9HCE3 1301 aa17.92■□□□□ 0.46
RNF4-213ENST00000509388 RNF113AO15541 343 aaKnown RBP17.91■□□□□ 0.46
RNF4-213ENST00000509388 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
RNF4-213ENST00000509388 SDSP20132 328 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 ADD2P35612 726 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 UBE3CQ15386 1083 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 MTMR14Q8NCE2 650 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 TMOD2Q9NZR1 351 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 DAGLAQ9Y4D2 1042 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 MROH7-TTC4A0A0A0MT08 1334 aa17.91■□□□□ 0.46
RNF4-213ENST00000509388 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 SPDYE2BA6NHP3 402 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 HIP1O00291 1037 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 WNT10BO00744 389 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 SPDYE6P0CI01 402 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 BTDP43251 543 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 TICAM2Q86XR7 235 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 TRPM4Q8TD43 1214 aa17.9■□□□□ 0.46
RNF4-213ENST00000509388 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
RNF4-213ENST00000509388 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 EGFRP00533 1210 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 NBPF9Q3BBW0 867 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 BMP2KLQ5H9B9 411 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 USP40Q9NVE5 1235 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 AKAP11Q9UKA4 1901 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 GAKO14976 1311 aa17.89■□□□□ 0.45
RNF4-213ENST00000509388 PSME4Q14997 1843 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 MAGEB6P1A0A0J9YX57 407 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 PLCG2P16885 1265 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 HIRAP54198 1017 aaPredicted RBP17.88■□□□□ 0.45
RNF4-213ENST00000509388 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
RNF4-213ENST00000509388 CERS3Q8IU89 383 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 MIGA1Q8NAN2 632 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 ZNF784Q8NCA9 323 aaPredicted RBP17.88■□□□□ 0.45
RNF4-213ENST00000509388 ZNF384Q8TF68 577 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 DCPSQ96C86 337 aaKnown RBP17.88■□□□□ 0.45
RNF4-213ENST00000509388 TDRD3Q9H7E2 651 aaKnown RBP17.88■□□□□ 0.45
RNF4-213ENST00000509388 DIAPH3Q9NSV4 1193 aa17.88■□□□□ 0.45
RNF4-213ENST00000509388 AATFQ9NY61 560 aaKnown RBP eCLIP17.88■□□□□ 0.45
RNF4-213ENST00000509388 PCDHAC2Q9Y5I4 1007 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms