RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.33
COPS4-207ENST00000509317 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
COPS4-207ENST00000509317 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
COPS4-207ENST00000509317 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
COPS4-207ENST00000509317 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
COPS4-207ENST00000509317 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
COPS4-207ENST00000509317 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
COPS4-207ENST00000509317 ZFYVE28Q9HCC9 887 aa13.01□□□□□ -0.33
COPS4-207ENST00000509317 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
COPS4-207ENST00000509317 UNCXA6NJT0 531 aa13□□□□□ -0.33
COPS4-207ENST00000509317 CTGFP29279 349 aa13□□□□□ -0.33
COPS4-207ENST00000509317 MAP3K9P80192 1104 aa13□□□□□ -0.33
COPS4-207ENST00000509317 MTFR1Q15390 333 aa13□□□□□ -0.33
COPS4-207ENST00000509317 CCDC184Q52MB2 194 aa13□□□□□ -0.33
COPS4-207ENST00000509317 LINS1Q8NG48 757 aa13□□□□□ -0.33
COPS4-207ENST00000509317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13□□□□□ -0.33
COPS4-207ENST00000509317 SHISA4Q96DD7 197 aa13□□□□□ -0.33
COPS4-207ENST00000509317 LAMB1P07942 1786 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 FAM205AQ6ZU69 1335 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 BTBD19C9JJ37 291 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 CRKP46108 304 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 GTF2A2P52657 109 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
COPS4-207ENST00000509317 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
COPS4-207ENST00000509317 PUS3Q9BZE2 481 aaKnown RBP12.99□□□□□ -0.33
COPS4-207ENST00000509317 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
COPS4-207ENST00000509317 ECM29Q5VYK3 1845 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 LACTBP83111 547 aaPredicted RBP12.98□□□□□ -0.33
COPS4-207ENST00000509317 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
COPS4-207ENST00000509317 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 TDRD7Q8NHU6 1098 aaKnown RBP12.98□□□□□ -0.33
COPS4-207ENST00000509317 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
COPS4-207ENST00000509317 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
COPS4-207ENST00000509317 SERPINA10Q9UK55 444 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 CSADQ9Y600 493 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 A0A0C4DFX4 3053 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
COPS4-207ENST00000509317 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 IRF6O14896 467 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
COPS4-207ENST00000509317 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
COPS4-207ENST00000509317 COL6A3P12111 3177 aa12.96□□□□□ -0.33
COPS4-207ENST00000509317 TLR2O60603 784 aa12.96□□□□□ -0.33
COPS4-207ENST00000509317 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
COPS4-207ENST00000509317 DPF3Q92784 378 aa12.96□□□□□ -0.33
COPS4-207ENST00000509317 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
COPS4-207ENST00000509317 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
COPS4-207ENST00000509317 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
COPS4-207ENST00000509317 CETPP11597 493 aa12.95□□□□□ -0.34
COPS4-207ENST00000509317 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
COPS4-207ENST00000509317 MIGA2Q7L4E1 593 aa12.95□□□□□ -0.34
COPS4-207ENST00000509317 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
COPS4-207ENST00000509317 VAMP4O75379 141 aa12.94□□□□□ -0.34
COPS4-207ENST00000509317 INPP5BP32019 993 aa12.94□□□□□ -0.34
COPS4-207ENST00000509317 PSMC4P43686 418 aa12.94□□□□□ -0.34
COPS4-207ENST00000509317 KIF22Q14807 665 aa12.94□□□□□ -0.34
COPS4-207ENST00000509317 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
COPS4-207ENST00000509317 GRM8O00222 908 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 OSBPP22059 807 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 TNNI2P48788 182 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
COPS4-207ENST00000509317 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 UBE4AQ14139 1066 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 C17orf99Q6UX52 265 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 KAZALD1Q96I82 304 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 SUCLG2Q96I99 432 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 ARAP2Q8WZ64 1704 aa12.93□□□□□ -0.34
COPS4-207ENST00000509317 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
COPS4-207ENST00000509317 CCL5P13501 91 aa12.92□□□□□ -0.34
COPS4-207ENST00000509317 PPIL2Q13356 520 aa12.92□□□□□ -0.34
COPS4-207ENST00000509317 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
COPS4-207ENST00000509317 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
COPS4-207ENST00000509317 SRRDQ9UH36 339 aa12.92□□□□□ -0.34
COPS4-207ENST00000509317 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
COPS4-207ENST00000509317 PDHXO00330 501 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 SOX1O00570 391 aaPredicted RBP12.91□□□□□ -0.34
COPS4-207ENST00000509317 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
COPS4-207ENST00000509317 GRK4P32298 578 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 BCAMP50895 628 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 MOGSQ13724 837 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 SLC4A10Q6U841 1118 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 UBE2Q1Q7Z7E8 422 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 VPS37DQ86XT2 251 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 KLHDC4Q8TBB5 520 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
COPS4-207ENST00000509317 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
COPS4-207ENST00000509317 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
COPS4-207ENST00000509317 BIN2Q9UBW5 565 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms