RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 SUZ12Q15022 739 aaKnown RBP10.43□□□□□ -0.74
DDX4-209ENST00000509312 MAP3K11Q16584 847 aa10.43□□□□□ -0.74
DDX4-209ENST00000509312 C9orf131Q5VYM1 1079 aa10.43□□□□□ -0.74
DDX4-209ENST00000509312 SV2BQ7L1I2 683 aa10.43□□□□□ -0.74
DDX4-209ENST00000509312 MAP4K3Q8IVH8 894 aa10.43□□□□□ -0.74
DDX4-209ENST00000509312 IGSF5Q9NSI5 407 aa10.43□□□□□ -0.74
DDX4-209ENST00000509312 SPDYE3A6NKU9 549 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 PIK3R2O00459 728 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 WISP1O95388 367 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 DLGAP3O95886 979 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 BMP6P22004 513 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 ARL4DP49703 201 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 HDLBPQ00341 1268 aaKnown RBP10.42□□□□□ -0.74
DDX4-209ENST00000509312 UBASH3BQ8TF42 649 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 SRA1Q9HD15 236 aaKnown RBP10.42□□□□□ -0.74
DDX4-209ENST00000509312 COPRSQ9NQ92 184 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 NOP53Q9NZM5 478 aaKnown RBP10.42□□□□□ -0.74
DDX4-209ENST00000509312 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
DDX4-209ENST00000509312 FAM181BA6NEQ2 426 aa10.41□□□□□ -0.74
DDX4-209ENST00000509312 SCAMP3O14828 347 aaKnown RBP10.41□□□□□ -0.74
DDX4-209ENST00000509312 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
DDX4-209ENST00000509312 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
DDX4-209ENST00000509312 METTL16Q86W50 562 aaKnown RBP10.41□□□□□ -0.74
DDX4-209ENST00000509312 SULF2Q8IWU5 870 aa10.41□□□□□ -0.74
DDX4-209ENST00000509312 GRIN3AQ8TCU5 1115 aa10.41□□□□□ -0.74
DDX4-209ENST00000509312 NOC4LQ9BVI4 516 aaKnown RBP10.41□□□□□ -0.74
DDX4-209ENST00000509312 ELNP15502 786 aa10.4□□□□□ -0.74
DDX4-209ENST00000509312 SELPP16109 830 aa10.4□□□□□ -0.74
DDX4-209ENST00000509312 ZNF76P36508 570 aa10.4□□□□□ -0.74
DDX4-209ENST00000509312 PRRT3Q5FWE3 981 aa10.4□□□□□ -0.74
DDX4-209ENST00000509312 PDZD3Q86UT5 571 aa10.4□□□□□ -0.74
DDX4-209ENST00000509312 ZC3H12CQ9C0D7 883 aaKnown RBP10.4□□□□□ -0.74
DDX4-209ENST00000509312 NME2P22392 152 aa10.39□□□□□ -0.75
DDX4-209ENST00000509312 MAOBP27338 520 aa10.39□□□□□ -0.75
DDX4-209ENST00000509312 PCNX4Q63HM2 1172 aa10.39□□□□□ -0.75
DDX4-209ENST00000509312 USP26Q9BXU7 913 aa10.39□□□□□ -0.75
DDX4-209ENST00000509312 TLR6Q9Y2C9 796 aa10.39□□□□□ -0.75
DDX4-209ENST00000509312 LOC100289279A0A1B0GTE1 492 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 SPATA31C1P0DKV0 1188 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 ARNTP27540 789 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 POU4F3Q15319 338 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 TTBK2Q6IQ55 1244 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 ERMP1Q7Z2K6 904 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 GGT7Q9UJ14 662 aa10.38□□□□□ -0.75
DDX4-209ENST00000509312 TCF3P15923 654 aa10.37□□□□□ -0.75
DDX4-209ENST00000509312 GSK3AP49840 483 aa10.37□□□□□ -0.75
DDX4-209ENST00000509312 LIG3P49916 1009 aa10.37□□□□□ -0.75
DDX4-209ENST00000509312 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
DDX4-209ENST00000509312 RNF34Q969K3 372 aa10.37□□□□□ -0.75
DDX4-209ENST00000509312 METTL5Q9NRN9 209 aaKnown RBP10.37□□□□□ -0.75
DDX4-209ENST00000509312 KBTBD4Q9NVX7 518 aa10.37□□□□□ -0.75
DDX4-209ENST00000509312 CYP11A1P05108 521 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 ZNF252P-AS1Q0IIN9 211 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 AP3B2Q13367 1082 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 DUOXA2Q1HG44 320 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 ZNF394Q53GI3 561 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 KIAA1211Q6ZU35 1233 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
DDX4-209ENST00000509312 CBX8Q9HC52 389 aa10.36□□□□□ -0.75
DDX4-209ENST00000509312 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 ALX3O95076 343 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 GSTP1P09211 210 aaKnown RBP10.35□□□□□ -0.75
DDX4-209ENST00000509312 HS2ST1Q7LGA3 356 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 AGGF1Q8N302 714 aaeCLIP10.35□□□□□ -0.75
DDX4-209ENST00000509312 PHC3Q8NDX5 983 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 WDR89Q96FK6 387 aaPredicted RBP10.35□□□□□ -0.75
DDX4-209ENST00000509312 RSRP1Q9BUV0 290 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 CCDC86Q9H6F5 360 aaKnown RBP10.35□□□□□ -0.75
DDX4-209ENST00000509312 PCDHB5Q9Y5E4 795 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 PCDHGB7Q9Y5F8 929 aa10.35□□□□□ -0.75
DDX4-209ENST00000509312 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
DDX4-209ENST00000509312 TFE3P19532 575 aaPredicted RBP10.34□□□□□ -0.75
DDX4-209ENST00000509312 PTPN11Q06124 597 aaPredicted RBP10.34□□□□□ -0.75
DDX4-209ENST00000509312 AGMOQ6ZNB7 445 aa10.34□□□□□ -0.75
DDX4-209ENST00000509312 NT5DC4Q86YG4 428 aa10.34□□□□□ -0.75
DDX4-209ENST00000509312 CORO1BQ9BR76 489 aa10.34□□□□□ -0.75
DDX4-209ENST00000509312 RACK1P63244 317 aaKnown RBP10.33□□□□□ -0.76
DDX4-209ENST00000509312 RAD51AP2Q09MP3 1159 aa10.33□□□□□ -0.76
DDX4-209ENST00000509312 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
DDX4-209ENST00000509312 ACAD11Q709F0 780 aa10.33□□□□□ -0.76
DDX4-209ENST00000509312 KCNB2Q92953 911 aa10.33□□□□□ -0.76
DDX4-209ENST00000509312 LENG1Q96BZ8 264 aaPredicted RBP10.33□□□□□ -0.76
DDX4-209ENST00000509312 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
DDX4-209ENST00000509312 TMEM74Q96NL1 305 aa10.33□□□□□ -0.76
DDX4-209ENST00000509312 ZNF862O60290 1169 aa10.32□□□□□ -0.76
DDX4-209ENST00000509312 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
DDX4-209ENST00000509312 LLGL2Q6P1M3 1020 aa10.32□□□□□ -0.76
DDX4-209ENST00000509312 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.32□□□□□ -0.76
DDX4-209ENST00000509312 RHOVQ96L33 236 aa10.32□□□□□ -0.76
DDX4-209ENST00000509312 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
DDX4-209ENST00000509312 F8W735 103 aaPredicted RBP10.31□□□□□ -0.76
DDX4-209ENST00000509312 PF4P02776 101 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 LIG1P18858 919 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 CACNA2D2Q9NY47 1150 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 USP21Q9UK80 565 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 CYP8B1Q9UNU6 501 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
DDX4-209ENST00000509312 CHRNA4P43681 627 aa10.3□□□□□ -0.76
DDX4-209ENST00000509312 RPS26P62854 115 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms