RNA–Protein interactions for RNA: ENST00000509259.5

CAST-225, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-225ENST00000509259 CCER1Q8TC90 406 aaPredicted RBP10.94□□□□□ -0.66
CAST-225ENST00000509259 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
CAST-225ENST00000509259 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
CAST-225ENST00000509259 FOXN1O15353 648 aa10.93□□□□□ -0.66
CAST-225ENST00000509259 NPR1P16066 1061 aa10.93□□□□□ -0.66
CAST-225ENST00000509259 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
CAST-225ENST00000509259 VEGFBP49765 207 aa10.93□□□□□ -0.66
CAST-225ENST00000509259 DHX9Q08211 1270 aaKnown RBP10.93□□□□□ -0.66
CAST-225ENST00000509259 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
CAST-225ENST00000509259 TAF1DQ9H5J8 278 aaPredicted RBP10.93□□□□□ -0.66
CAST-225ENST00000509259 DICER1Q9UPY3 1922 aaKnown RBP10.93□□□□□ -0.66
CAST-225ENST00000509259 CACNA1SQ13698 1873 aa10.92□□□□□ -0.66
CAST-225ENST00000509259 MAN1A2O60476 641 aa10.92□□□□□ -0.66
CAST-225ENST00000509259 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
CAST-225ENST00000509259 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
CAST-225ENST00000509259 NBPF20Q3BBV1 942 aa10.92□□□□□ -0.66
CAST-225ENST00000509259 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
CAST-225ENST00000509259 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
CAST-225ENST00000509259 ZNF277Q9NRM2 450 aaPredicted RBP10.92□□□□□ -0.66
CAST-225ENST00000509259 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
CAST-225ENST00000509259 SLX4Q8IY92 1834 aa10.92□□□□□ -0.66
CAST-225ENST00000509259 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 KCNQ3O43525 872 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
CAST-225ENST00000509259 CLEC4GQ6UXB4 293 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 TPTE2Q6XPS3 522 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 NPAS3Q8IXF0 933 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 RTKN2Q8IZC4 609 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 CFAP53Q96M91 514 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
CAST-225ENST00000509259 NIP7Q9Y221 180 aaKnown RBP eCLIP10.91□□□□□ -0.66
CAST-225ENST00000509259 CEMIPQ8WUJ3 1361 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 PASKQ96RG2 1323 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
CAST-225ENST00000509259 PRKAR2BP31323 418 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 EPHX2P34913 555 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 RAB15P59190 212 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 INTS6LQ5JSJ4 861 aaKnown RBP10.9□□□□□ -0.66
CAST-225ENST00000509259 PNMA8AQ86V59 439 aaPredicted RBP10.9□□□□□ -0.66
CAST-225ENST00000509259 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
CAST-225ENST00000509259 SIPA1L3O60292 1781 aaPredicted RBP10.9□□□□□ -0.67
CAST-225ENST00000509259 BCORQ6W2J9 1755 aa10.9□□□□□ -0.67
CAST-225ENST00000509259 RNF123Q5XPI4 1314 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
CAST-225ENST00000509259 WIPF1O43516 503 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 ALDH1B1P30837 517 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 CBLBQ13191 982 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 OLFM4Q6UX06 510 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 JDP2Q8WYK2 163 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 IRF7Q92985 503 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 ABT1Q9ULW3 272 aaKnown RBP10.89□□□□□ -0.67
CAST-225ENST00000509259 ARFGEF2Q9Y6D5 1785 aa10.89□□□□□ -0.67
CAST-225ENST00000509259 SCN4AP35499 1836 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 PRAMEF22A3QJZ6 481 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 IARSP41252 1262 aaKnown RBP10.88□□□□□ -0.67
CAST-225ENST00000509259 LBX1P52954 281 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
CAST-225ENST00000509259 LCE2CQ5TA81 110 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 MAP1SQ66K74 1059 aaPredicted RBP10.88□□□□□ -0.67
CAST-225ENST00000509259 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 PHACTR3Q96KR7 559 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
CAST-225ENST00000509259 H3BM21 787 aa10.87□□□□□ -0.67
CAST-225ENST00000509259 LMOD1P29536 600 aaPredicted RBP10.87□□□□□ -0.67
CAST-225ENST00000509259 EIF6P56537 245 aaKnown RBP10.87□□□□□ -0.67
CAST-225ENST00000509259 DEFB115Q30KQ5 88 aa10.87□□□□□ -0.67
CAST-225ENST00000509259 MCM10Q7L590 875 aa10.87□□□□□ -0.67
CAST-225ENST00000509259 GPC2Q8N158 579 aa10.87□□□□□ -0.67
CAST-225ENST00000509259 SYNE4Q8N205 404 aa10.87□□□□□ -0.67
CAST-225ENST00000509259 GJA3Q9Y6H8 435 aa10.87□□□□□ -0.67
CAST-225ENST00000509259 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
CAST-225ENST00000509259 U2AF1L5P0DN76 240 aaPredicted RBP10.86□□□□□ -0.67
CAST-225ENST00000509259 U2AF1Q01081 240 aaKnown RBP eCLIP10.86□□□□□ -0.67
CAST-225ENST00000509259 MAP2K1Q02750 393 aaPredicted RBP10.86□□□□□ -0.67
CAST-225ENST00000509259 GRM1Q13255 1194 aa10.86□□□□□ -0.67
CAST-225ENST00000509259 RPGRQ92834 1020 aaKnown RBP10.86□□□□□ -0.67
CAST-225ENST00000509259 NYXQ9GZU5 481 aa10.86□□□□□ -0.67
CAST-225ENST00000509259 NPC1L1Q9UHC9 1359 aa10.86□□□□□ -0.67
CAST-225ENST00000509259 RASSF10A6NK89 507 aa10.85□□□□□ -0.67
CAST-225ENST00000509259 FZD9O00144 591 aa10.85□□□□□ -0.67
CAST-225ENST00000509259 NBPF10Q6P3W6 841 aaKnown RBP10.85□□□□□ -0.67
CAST-225ENST00000509259 Q6ZVU0 165 aa10.85□□□□□ -0.67
CAST-225ENST00000509259 NGEFQ8N5V2 710 aa10.85□□□□□ -0.67
CAST-225ENST00000509259 NBPF15Q8N660 670 aa10.85□□□□□ -0.67
CAST-225ENST00000509259 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
CAST-225ENST00000509259 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 DCTN1Q14203 1278 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 HLFQ16534 295 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 CC2D2BQ6DHV5 1058 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 KIF6Q6ZMV9 814 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 PSMD1Q99460 953 aa10.84□□□□□ -0.67
CAST-225ENST00000509259 TMX4Q9H1E5 349 aaPredicted RBP10.84□□□□□ -0.67
CAST-225ENST00000509259 TTLL8A6PVC2 850 aa10.83□□□□□ -0.68
CAST-225ENST00000509259 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
CAST-225ENST00000509259 NEFMP07197 916 aa10.83□□□□□ -0.68
CAST-225ENST00000509259 HSPA8P11142 646 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms