RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 COPRSQ9NQ92 184 aa28.64■■■□□ 2.18
RETREG1-204ENST00000509048 ZNF70Q9UC06 446 aaPredicted RBP28.64■■■□□ 2.18
RETREG1-204ENST00000509048 ANGEL1Q9UNK9 670 aaKnown RBP28.64■■■□□ 2.18
RETREG1-204ENST00000509048 RASA3Q14644 834 aa28.63■■■□□ 2.17
RETREG1-204ENST00000509048 SUPT20HL1Q3ZLR7 823 aa28.63■■■□□ 2.17
RETREG1-204ENST00000509048 ABHD8Q96I13 439 aa28.63■■■□□ 2.17
RETREG1-204ENST00000509048 TDRD3Q9H7E2 651 aaKnown RBP28.63■■■□□ 2.17
RETREG1-204ENST00000509048 CEP126Q9P2H0 1117 aa28.63■■■□□ 2.17
RETREG1-204ENST00000509048 SUGT1Q9Y2Z0 365 aa28.63■■■□□ 2.17
RETREG1-204ENST00000509048 IL15P40933 162 aaPredicted RBP28.62■■■□□ 2.17
RETREG1-204ENST00000509048 TNFAIP1Q13829 316 aa28.62■■■□□ 2.17
RETREG1-204ENST00000509048 MRIQ9BWK5 157 aa28.62■■■□□ 2.17
RETREG1-204ENST00000509048 FZD1Q9UP38 647 aa28.62■■■□□ 2.17
RETREG1-204ENST00000509048 PA2G4Q9UQ80 394 aaKnown RBP28.62■■■□□ 2.17
RETREG1-204ENST00000509048 PPP1R12BO60237 982 aaPredicted RBP28.61■■■□□ 2.17
RETREG1-204ENST00000509048 MTX1Q13505 466 aa28.61■■■□□ 2.17
RETREG1-204ENST00000509048 ATP2B3Q16720 1220 aa28.61■■■□□ 2.17
RETREG1-204ENST00000509048 NBPF12Q5TAG4 269 aaPredicted RBP28.61■■■□□ 2.17
RETREG1-204ENST00000509048 FRAT1Q92837 279 aaPredicted RBP28.61■■■□□ 2.17
RETREG1-204ENST00000509048 TNNQ9UQP3 1299 aa28.61■■■□□ 2.17
RETREG1-204ENST00000509048 UNCXA6NJT0 531 aa28.6■■■□□ 2.17
RETREG1-204ENST00000509048 TEKT1Q969V4 418 aa28.6■■■□□ 2.17
RETREG1-204ENST00000509048 TM4SF4P48230 202 aa28.59■■■□□ 2.17
RETREG1-204ENST00000509048 WDR66Q8TBY9 1149 aa28.58■■■□□ 2.17
RETREG1-204ENST00000509048 ZDHHC15Q96MV8 337 aa28.58■■■□□ 2.17
RETREG1-204ENST00000509048 MYH13Q9UKX3 1938 aa28.58■■■□□ 2.17
RETREG1-204ENST00000509048 MAST3O60307 1309 aa28.58■■■□□ 2.17
RETREG1-204ENST00000509048 SPRYD7Q5W111 196 aa28.57■■■□□ 2.16
RETREG1-204ENST00000509048 TEPSINQ96N21 525 aa28.57■■■□□ 2.16
RETREG1-204ENST00000509048 ZBTB22O15209 634 aa28.56■■■□□ 2.16
RETREG1-204ENST00000509048 SRGAP3O43295 1099 aa28.56■■■□□ 2.16
RETREG1-204ENST00000509048 MKRN3Q13064 507 aaKnown RBP28.56■■■□□ 2.16
RETREG1-204ENST00000509048 CLUAP1Q96AJ1 413 aa28.56■■■□□ 2.16
RETREG1-204ENST00000509048 TCP10L2B9ZVM9 353 aa28.55■■■□□ 2.16
RETREG1-204ENST00000509048 USP2O75604 605 aaPredicted RBP28.55■■■□□ 2.16
RETREG1-204ENST00000509048 SREBF2Q12772 1141 aa28.55■■■□□ 2.16
RETREG1-204ENST00000509048 SLC10A4Q96EP9 437 aa28.55■■■□□ 2.16
RETREG1-204ENST00000509048 CLMNQ96JQ2 1002 aa28.55■■■□□ 2.16
RETREG1-204ENST00000509048 MCOLN1Q9GZU1 580 aa28.55■■■□□ 2.16
RETREG1-204ENST00000509048 GNAI2P04899 355 aa28.54■■■□□ 2.16
RETREG1-204ENST00000509048 IREB2P48200 963 aaKnown RBP28.54■■■□□ 2.16
RETREG1-204ENST00000509048 TNNI2P48788 182 aa28.54■■■□□ 2.16
RETREG1-204ENST00000509048 ZKSCAN2Q63HK3 967 aa28.54■■■□□ 2.16
RETREG1-204ENST00000509048 APOBEC3HQ6NTF7 200 aaKnown RBP28.54■■■□□ 2.16
RETREG1-204ENST00000509048 HHIPL2Q6UWX4 724 aa28.54■■■□□ 2.16
RETREG1-204ENST00000509048 GNL3LQ9NVN8 582 aaKnown RBP28.54■■■□□ 2.16
RETREG1-204ENST00000509048 ZBTB48P10074 688 aaPredicted RBP28.53■■■□□ 2.16
RETREG1-204ENST00000509048 CDAN1Q8IWY9 1227 aa28.53■■■□□ 2.16
RETREG1-204ENST00000509048 TMEM39BQ9GZU3 492 aa28.53■■■□□ 2.16
RETREG1-204ENST00000509048 SEMA3EO15041 775 aa28.52■■■□□ 2.16
RETREG1-204ENST00000509048 PHKA1P46020 1223 aa28.52■■■□□ 2.16
RETREG1-204ENST00000509048 LAMB1P07942 1786 aa28.52■■■□□ 2.16
RETREG1-204ENST00000509048 ZBED9Q6R2W3 1325 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 SALL1Q9NSC2 1324 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 DGKZQ13574 1117 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 FKBP1CQ5VVH2 108 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 ANKRD13AQ8IZ07 590 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 TMEM57Q8N5G2 664 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 WNK4Q96J92 1243 aa28.51■■■□□ 2.15
RETREG1-204ENST00000509048 ADORA1P30542 326 aa28.5■■■□□ 2.15
RETREG1-204ENST00000509048 CACNB3P54284 484 aa28.5■■■□□ 2.15
RETREG1-204ENST00000509048 CCDC102BQ68D86 513 aa28.5■■■□□ 2.15
RETREG1-204ENST00000509048 CFHR5Q9BXR6 569 aa28.5■■■□□ 2.15
RETREG1-204ENST00000509048 DENND2AQ9ULE3 1009 aa28.5■■■□□ 2.15
RETREG1-204ENST00000509048 OTOFQ9HC10 1997 aa28.5■■■□□ 2.15
RETREG1-204ENST00000509048 MANSC4A6NHS7 340 aaPredicted RBP28.49■■■□□ 2.15
RETREG1-204ENST00000509048 TBC1D8O95759 1140 aa28.49■■■□□ 2.15
RETREG1-204ENST00000509048 PRDX5P30044 214 aa28.49■■■□□ 2.15
RETREG1-204ENST00000509048 FAM83AQ86UY5 434 aa28.49■■■□□ 2.15
RETREG1-204ENST00000509048 TMOD2Q9NZR1 351 aa28.49■■■□□ 2.15
RETREG1-204ENST00000509048 INHBEP58166 350 aa28.48■■■□□ 2.15
RETREG1-204ENST00000509048 TIMM10P62072 90 aa28.48■■■□□ 2.15
RETREG1-204ENST00000509048 TFCP2Q12800 502 aa28.48■■■□□ 2.15
RETREG1-204ENST00000509048 AKAP2Q9Y2D5 859 aa28.48■■■□□ 2.15
RETREG1-204ENST00000509048 PNMA6EA0A0J9YXQ4 647 aa28.47■■■□□ 2.15
RETREG1-204ENST00000509048 NOM1Q5C9Z4 860 aaKnown RBP28.47■■■□□ 2.15
RETREG1-204ENST00000509048 A0A1B0GUL7 405 aa28.46■■■□□ 2.15
RETREG1-204ENST00000509048 LDHBP07195 334 aaKnown RBP28.46■■■□□ 2.15
RETREG1-204ENST00000509048 GJA5P36382 358 aa28.46■■■□□ 2.15
RETREG1-204ENST00000509048 DAGLAQ9Y4D2 1042 aa28.46■■■□□ 2.15
RETREG1-204ENST00000509048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.46■■■□□ 2.15
RETREG1-204ENST00000509048 PDS5AQ29RF7 1337 aaKnown RBP28.45■■■□□ 2.15
RETREG1-204ENST00000509048 RASGRF1Q13972 1273 aa28.45■■■□□ 2.14
RETREG1-204ENST00000509048 DIXDC1Q155Q3 683 aa28.45■■■□□ 2.14
RETREG1-204ENST00000509048 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.45■■■□□ 2.14
RETREG1-204ENST00000509048 RPAP1Q9BWH6 1393 aaPredicted RBP28.45■■■□□ 2.14
RETREG1-204ENST00000509048 ALDH1A1P00352 501 aa28.44■■■□□ 2.14
RETREG1-204ENST00000509048 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.44■■■□□ 2.14
RETREG1-204ENST00000509048 IFNL1Q8IU54 200 aa28.44■■■□□ 2.14
RETREG1-204ENST00000509048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.44■■■□□ 2.14
RETREG1-204ENST00000509048 ZNF296Q8WUU4 475 aaPredicted RBP28.44■■■□□ 2.14
RETREG1-204ENST00000509048 XAGE2Q96GT9 111 aa28.44■■■□□ 2.14
RETREG1-204ENST00000509048 CCDC85CA6NKD9 419 aa28.43■■■□□ 2.14
RETREG1-204ENST00000509048 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
RETREG1-204ENST00000509048 CTU1Q7Z7A3 348 aaKnown RBP28.43■■■□□ 2.14
RETREG1-204ENST00000509048 ZGPATQ8N5A5 531 aaKnown RBP28.43■■■□□ 2.14
RETREG1-204ENST00000509048 GPR25O00155 361 aa28.42■■■□□ 2.14
RETREG1-204ENST00000509048 MAP3K9P80192 1104 aa28.42■■■□□ 2.14
RETREG1-204ENST00000509048 CDC42EP5Q6NZY7 148 aa28.42■■■□□ 2.14
RETREG1-204ENST00000509048 FTSJ3Q8IY81 847 aaKnown RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms