RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 RNF41Q9H4P4 317 aaPredicted RBP10.86□□□□□ -0.67
HTT-205ENST00000509043 TMEM63CQ9P1W3 806 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 ANGEL1Q9UNK9 670 aaKnown RBP10.86□□□□□ -0.67
HTT-205ENST00000509043 CNPY2Q9Y2B0 182 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 TIAM2Q8IVF5 1701 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 SBF2Q86WG5 1849 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 PTPDC1A2A3K4 754 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 LIFRP42702 1097 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 BCAMP50895 628 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 DNM1Q05193 864 aaKnown RBP10.85□□□□□ -0.67
HTT-205ENST00000509043 APOBRQ0VD83 1088 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 CCDC173Q0VFZ6 552 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 CDC37L1Q7L3B6 337 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 FBXO33Q7Z6M2 555 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 VPS37DQ86XT2 251 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 TMTC2Q8N394 836 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 A0A1B0GUL6 1792 aa10.85□□□□□ -0.67
HTT-205ENST00000509043 FIBPO43427 364 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 MBD4O95243 580 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 HSPA1LP34931 641 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 RESTQ13127 1097 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
HTT-205ENST00000509043 SART3Q15020 963 aaKnown RBP10.84□□□□□ -0.67
HTT-205ENST00000509043 SGMS1Q86VZ5 419 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 ZNF396Q96N95 335 aaPredicted RBP10.84□□□□□ -0.67
HTT-205ENST00000509043 TSPY26PQ9H489 355 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 LEMD3Q9Y2U8 911 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 NID2Q14112 1375 aa10.84□□□□□ -0.67
HTT-205ENST00000509043 KLF18A0A0U1RQI7 1052 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 SYCE3A1L190 88 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 GOLGA6L4A6NEF3 574 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 GOLGA8BA8MQT2 603 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 GSG1L2A8MUP6 293 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 SH2B2O14492 632 aaPredicted RBP10.83□□□□□ -0.68
HTT-205ENST00000509043 CPLX1O14810 134 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 JAK2O60674 1132 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 ANTXR2P58335 489 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 HAND2P61296 217 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 PPP2R5BQ15173 497 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 UVSSAQ2YD98 709 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 AKNAD1Q5T1N1 836 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 SPTY2D1Q68D10 685 aaPredicted RBP10.83□□□□□ -0.68
HTT-205ENST00000509043 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 C15orf52Q6ZUT6 534 aaKnown RBP10.83□□□□□ -0.68
HTT-205ENST00000509043 CERS3Q8IU89 383 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 FAM43AQ8N2R8 423 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 FAM84BQ96KN1 310 aaPredicted RBP10.83□□□□□ -0.68
HTT-205ENST00000509043 SPATA32Q96LK8 384 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 PPP1R9BQ96SB3 815 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 BRIP1Q9BX63 1249 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 LRRC2Q9BYS8 371 aa10.83□□□□□ -0.68
HTT-205ENST00000509043 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
HTT-205ENST00000509043 DUOX1Q9NRD9 1551 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 C4AP0C0L4 1744 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 MAGEB6P1A0A0J9YX57 407 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 NPHP1O15259 732 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 GADD45BO75293 160 aaPredicted RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 CTDNEP1O95476 244 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 CYP7A1P22680 504 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 HIBADHP31937 336 aaKnown RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 TDO2P48775 406 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 GRAPQ13588 217 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 HS1BP3Q53T59 392 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 SYNE3Q6ZMZ3 975 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 MFSD6Q6ZSS7 791 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 PTF1AQ7RTS3 328 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 TMC4Q7Z404 712 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 BRAPQ7Z569 592 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 CNBD1Q8NA66 436 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 CELF1Q92879 486 aaKnown RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 GDPD2Q9HCC8 539 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 DDX19AQ9NUU7 478 aaKnown RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 RAI14Q9P0K7 980 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
HTT-205ENST00000509043 SLC4A4Q9Y6R1 1079 aa10.82□□□□□ -0.68
HTT-205ENST00000509043 CCDC196A0A1B0GTZ2 297 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 TM4SF1P30408 202 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 METAP2P50579 478 aaKnown RBP eCLIP10.81□□□□□ -0.68
HTT-205ENST00000509043 ST5P78524 1137 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 LEO1Q8WVC0 666 aaPredicted RBP10.81□□□□□ -0.68
HTT-205ENST00000509043 WASF1Q92558 559 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
HTT-205ENST00000509043 DDX11Q96FC9 970 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
HTT-205ENST00000509043 EPB41L4AQ9HCS5 686 aaPredicted RBP10.81□□□□□ -0.68
HTT-205ENST00000509043 NAP1L2Q9ULW6 460 aaPredicted RBP10.81□□□□□ -0.68
HTT-205ENST00000509043 NSFL1CQ9UNZ2 370 aaKnown RBP10.81□□□□□ -0.68
HTT-205ENST00000509043 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms