RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SREBF2Q12772 1141 aa15.63■□□□□ 0.09
PDPN-208ENST00000509009 KIF16BQ96L93 1317 aa15.63■□□□□ 0.09
PDPN-208ENST00000509009 INHBEP58166 350 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 CTU1Q7Z7A3 348 aaKnown RBP15.62■□□□□ 0.09
PDPN-208ENST00000509009 LPIN2Q92539 896 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 ARHGAP45Q92619 1136 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 TEPSINQ96N21 525 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.62■□□□□ 0.09
PDPN-208ENST00000509009 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
PDPN-208ENST00000509009 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
PDPN-208ENST00000509009 TCP10L2B9ZVM9 353 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 CIAO1O76071 339 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 SLC5A1P13866 664 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 IREB2P48200 963 aaKnown RBP15.61■□□□□ 0.09
PDPN-208ENST00000509009 ZNF296Q8WUU4 475 aaPredicted RBP15.61■□□□□ 0.09
PDPN-208ENST00000509009 WNK4Q96J92 1243 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 SIL1Q9H173 461 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 R3HDMLQ9H3Y0 253 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
PDPN-208ENST00000509009 MANSC4A6NHS7 340 aaPredicted RBP15.6■□□□□ 0.09
PDPN-208ENST00000509009 GPR25O00155 361 aa15.6■□□□□ 0.09
PDPN-208ENST00000509009 ZBTB48P10074 688 aaPredicted RBP15.6■□□□□ 0.09
PDPN-208ENST00000509009 NOM1Q5C9Z4 860 aaKnown RBP15.6■□□□□ 0.09
PDPN-208ENST00000509009 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
PDPN-208ENST00000509009 CDAN1Q8IWY9 1227 aa15.6■□□□□ 0.09
PDPN-208ENST00000509009 ANKRD13AQ8IZ07 590 aa15.6■□□□□ 0.09
PDPN-208ENST00000509009 TEKT1Q969V4 418 aa15.6■□□□□ 0.09
PDPN-208ENST00000509009 MEIS3Q99687 375 aa15.6■□□□□ 0.09
PDPN-208ENST00000509009 CFHR5Q9BXR6 569 aa15.6■□□□□ 0.09
PDPN-208ENST00000509009 GJA5P36382 358 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 TNNI2P48788 182 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 APOBEC3HQ6NTF7 200 aaKnown RBP15.59■□□□□ 0.09
PDPN-208ENST00000509009 HHIPL2Q6UWX4 724 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 WDR66Q8TBY9 1149 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 ZDHHC15Q96MV8 337 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 TMEM39BQ9GZU3 492 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 COPRSQ9NQ92 184 aa15.59■□□□□ 0.09
PDPN-208ENST00000509009 PA2G4Q9UQ80 394 aaKnown RBP15.59■□□□□ 0.09
PDPN-208ENST00000509009 ALDH1A1P00352 501 aa15.58■□□□□ 0.08
PDPN-208ENST00000509009 CACNB3P54284 484 aa15.58■□□□□ 0.08
PDPN-208ENST00000509009 ATP2B3Q16720 1220 aa15.58■□□□□ 0.08
PDPN-208ENST00000509009 IFNL1Q8IU54 200 aa15.58■□□□□ 0.08
PDPN-208ENST00000509009 IPO8O15397 1037 aaKnown RBP15.57■□□□□ 0.08
PDPN-208ENST00000509009 IL15P40933 162 aaPredicted RBP15.57■□□□□ 0.08
PDPN-208ENST00000509009 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
PDPN-208ENST00000509009 FKBP1CQ5VVH2 108 aa15.57■□□□□ 0.08
PDPN-208ENST00000509009 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.57■□□□□ 0.08
PDPN-208ENST00000509009 IGF2BP3O00425 579 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDPN-208ENST00000509009 FKTNO75072 461 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 BCAR3O75815 825 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 GNAI3P08754 354 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 MLLT1Q03111 559 aaPredicted RBP15.56■□□□□ 0.08
PDPN-208ENST00000509009 PKN2Q16513 984 aaKnown RBP15.56■□□□□ 0.08
PDPN-208ENST00000509009 FAM83AQ86UY5 434 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 ELP3Q9H9T3 547 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
PDPN-208ENST00000509009 MAST3O60307 1309 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 ECM29Q5VYK3 1845 aa15.56■□□□□ 0.08
PDPN-208ENST00000509009 TESPA1A2RU30 521 aaPredicted RBP15.55■□□□□ 0.08
PDPN-208ENST00000509009 PHKA1P46020 1223 aa15.55■□□□□ 0.08
PDPN-208ENST00000509009 TIMM10P62072 90 aa15.55■□□□□ 0.08
PDPN-208ENST00000509009 PTPN18Q99952 460 aa15.55■□□□□ 0.08
PDPN-208ENST00000509009 TNNQ9UQP3 1299 aa15.55■□□□□ 0.08
PDPN-208ENST00000509009 ZBTB22O15209 634 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 TRIM27P14373 513 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 ADORA1P30542 326 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 MTX1Q13505 466 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 ATF7IPQ6VMQ6 1270 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 MIER1Q8N108 512 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
PDPN-208ENST00000509009 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 OPTNQ96CV9 577 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 MS4A4AQ96JQ5 239 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 TMOD2Q9NZR1 351 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
PDPN-208ENST00000509009 SEMA3EO15041 775 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 SRGAP3O43295 1099 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 PRDX5P30044 214 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 VGLL4Q14135 290 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 DIXDC1Q155Q3 683 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 CCDC102BQ68D86 513 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 OTUD7BQ6GQQ9 843 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
PDPN-208ENST00000509009 DENND2AQ9ULE3 1009 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 DAGLAQ9Y4D2 1042 aa15.53■□□□□ 0.08
PDPN-208ENST00000509009 SALL1Q9NSC2 1324 aa15.52■□□□□ 0.08
PDPN-208ENST00000509009 LDHBP07195 334 aaKnown RBP15.52■□□□□ 0.08
PDPN-208ENST00000509009 CDC42EP5Q6NZY7 148 aa15.52■□□□□ 0.08
PDPN-208ENST00000509009 FAM151AQ8WW52 585 aa15.52■□□□□ 0.08
PDPN-208ENST00000509009 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.08
PDPN-208ENST00000509009 CSADQ9Y600 493 aa15.52■□□□□ 0.08
PDPN-208ENST00000509009 GNAI2P04899 355 aa15.51■□□□□ 0.07
PDPN-208ENST00000509009 TFCP2Q12800 502 aa15.51■□□□□ 0.07
PDPN-208ENST00000509009 FBXO46Q6PJ61 603 aaPredicted RBP15.51■□□□□ 0.07
PDPN-208ENST00000509009 BRI3BPQ8WY22 251 aa15.51■□□□□ 0.07
PDPN-208ENST00000509009 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms