RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.06	□□□□□ -0.8
UBE2D3-222	ENST00000508238	ABT1	Q9ULW3	272 aa	Known RBP	10.06	□□□□□ -0.8
UBE2D3-222	ENST00000508238	TLL2	Q9Y6L7	1015 aa		10.06	□□□□□ -0.8
UBE2D3-222	ENST00000508238	ZNF804B	A4D1E1	1349 aa		10.06	□□□□□ -0.8
UBE2D3-222	ENST00000508238	EGFR	P00533	1210 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	USP17L8	P0C7I0	530 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	CHRND	Q07001	517 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	ALDH1L2	Q3SY69	923 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	EPHA10	Q5JZY3	1008 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	DACT2	Q5SW24	774 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	LMBR1L	Q6UX01	489 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	SAPCD2	Q86UD0	394 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	TXNRD3	Q86VQ6	643 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	KAZALD1	Q96I82	304 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	WBP1L	Q9NX94	342 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	SPEF2	Q9C093	1822 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	WDR33	Q9C0J8	1336 aa	Known RBP	10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	IRS2	Q9Y4H2	1338 aa		10.05	□□□□□ -0.8
UBE2D3-222	ENST00000508238	CELF2	O95319	508 aa	Known RBP	10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	ECE1	P42892	770 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	EMP3	P54852	163 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	BRPF1	P55201	1214 aa	Predicted RBP	10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	CCDC57	Q2TAC2	916 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	KIF4B	Q2VIQ3	1234 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	SLC4A10	Q6U841	1118 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	KRT26	Q7Z3Y9	468 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	USP48	Q86UV5	1035 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	DCPS	Q96C86	337 aa	Known RBP	10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	CDCA7L	Q96GN5	454 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	MYO3B	Q8WXR4	1341 aa		10.04	□□□□□ -0.8
UBE2D3-222	ENST00000508238	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	MAP2K2	P36507	400 aa		10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	MAP2K1	Q02750	393 aa	Predicted RBP	10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	MAP2K5	Q13163	448 aa		10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	RABL6	Q3YEC7	729 aa	Predicted RBP	10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	VARS2	Q5ST30	1063 aa	Known RBP	10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	LDHAL6A	Q6ZMR3	332 aa		10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	CAPNS2	Q96L46	248 aa		10.03	□□□□□ -0.8
UBE2D3-222	ENST00000508238	IRF6	O14896	467 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	PTPRE	P23469	700 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	KLRK1	P26718	216 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	KCNJ4	P48050	445 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	SCARF1	Q14162	830 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	TTLL5	Q6EMB2	1281 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	SULF1	Q8IWU6	871 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	OGFOD1	Q8N543	542 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	SUCLG2	Q96I99	432 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	USP44	Q9H0E7	712 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	CD209	Q9NNX6	404 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	MYOZ2	Q9NPC6	264 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	PITPNM2	Q9BZ72	1349 aa		10.02	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ZNF646	O15015	1829 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	FOXN1	O15353	648 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	TAF5L	O75529	589 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	IL1R1	P14778	569 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	COL9A1	P20849	921 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	CTCF	P49711	727 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	HELB	Q8NG08	1087 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	AIDA	Q96BJ3	306 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ZNF594	Q96JF6	807 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	PRDM10	Q9NQV6	1147 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	GGA3	Q9NZ52	723 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	CHMP3	Q9Y3E7	222 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	RIPOR2	Q9Y4F9	1068 aa		10.01	□□□□□ -0.81
UBE2D3-222	ENST00000508238	SNAP23	O00161	211 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	FKBP1A	P62942	108 aa	Known RBP	10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	GTF2I	P78347	998 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	UBE4A	Q14139	1066 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	TAF7L	Q5H9L4	462 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ANGEL2	Q5VTE6	544 aa	Known RBP	10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	CYP4F22	Q6NT55	531 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	DLK2	Q6UY11	383 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ANKRD44	Q8N8A2	993 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	CCDC102A	Q96A19	550 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ZBED3	Q96IU2	234 aa	Predicted RBP	10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	BICC1	Q9H694	974 aa	Known RBP	10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	GBA2	Q9HCG7	927 aa	Predicted RBP	10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	CNNM1	Q9NRU3	951 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	SMC4	Q9NTJ3	1288 aa		10	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ASTN2	O75129	1339 aa	Predicted RBP	10	□□□□□ -0.81
UBE2D3-222	ENST00000508238		A0A1B0GUL6	1792 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	FAM205C	A6NFA0	338 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ADM5	C9JUS6	153 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	WNT10B	O00744	389 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	TRIM66	O15016	1216 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	SASH1	O94885	1247 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	HUNK	P57058	714 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	FKBP1B	P68106	108 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	NOG	Q13253	232 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	NBPF9	Q3BBW0	867 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	PADI6	Q6TGC4	694 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ZNF804A	Q7Z570	1209 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	C2orf69	Q8N8R5	385 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	MTMR14	Q8NCE2	650 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ARHGAP45	Q92619	1136 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	KCNK17	Q96T54	332 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	MXD3	Q9BW11	206 aa		9.99	□□□□□ -0.81
UBE2D3-222	ENST00000508238	ZNF408	Q9H9D4	720 aa		9.99	□□□□□ -0.81

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