RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 EAF2Q96CJ1 260 aaPredicted RBP27.43■■□□□ 1.98
SNCB-204ENST00000508006 GNL3LQ9NVN8 582 aaKnown RBP27.43■■□□□ 1.98
SNCB-204ENST00000508006 TRPA1O75762 1119 aa27.42■■□□□ 1.98
SNCB-204ENST00000508006 TDRD7Q8NHU6 1098 aaKnown RBP27.42■■□□□ 1.98
SNCB-204ENST00000508006 IL1RAPL2Q9NP60 686 aa27.42■■□□□ 1.98
SNCB-204ENST00000508006 SAGE1Q9NXZ1 904 aa27.42■■□□□ 1.98
SNCB-204ENST00000508006 ZBTB47Q9UFB7 747 aaPredicted RBP27.42■■□□□ 1.98
SNCB-204ENST00000508006 SCN9AQ15858 1988 aa27.42■■□□□ 1.98
SNCB-204ENST00000508006 SEMA3EO15041 775 aa27.41■■□□□ 1.98
SNCB-204ENST00000508006 GORABQ5T7V8 394 aa27.41■■□□□ 1.98
SNCB-204ENST00000508006 ZNF646O15015 1829 aaPredicted RBP27.41■■□□□ 1.98
SNCB-204ENST00000508006 BCAMP50895 628 aa27.4■■□□□ 1.98
SNCB-204ENST00000508006 SCARF1Q14162 830 aa27.4■■□□□ 1.98
SNCB-204ENST00000508006 CCDC102BQ68D86 513 aa27.4■■□□□ 1.98
SNCB-204ENST00000508006 RSBN1LQ6PCB5 846 aaPredicted RBP27.4■■□□□ 1.98
SNCB-204ENST00000508006 AACSQ86V21 672 aa27.4■■□□□ 1.98
SNCB-204ENST00000508006 AGBL3Q8NEM8 1001 aa27.4■■□□□ 1.98
SNCB-204ENST00000508006 IFIT2P09913 472 aaKnown RBP27.39■■□□□ 1.98
SNCB-204ENST00000508006 CCDC158Q5M9N0 1113 aa27.39■■□□□ 1.98
SNCB-204ENST00000508006 ANGEL2Q5VTE6 544 aaKnown RBP27.39■■□□□ 1.98
SNCB-204ENST00000508006 CDCA5Q96FF9 252 aa27.39■■□□□ 1.98
SNCB-204ENST00000508006 RNF186Q9NXI6 227 aa27.39■■□□□ 1.98
SNCB-204ENST00000508006 USP17L3A6NCW0 530 aa27.38■■□□□ 1.97
SNCB-204ENST00000508006 USP17L4A6NCW7 530 aa27.38■■□□□ 1.97
SNCB-204ENST00000508006 ADORA1P30542 326 aa27.38■■□□□ 1.97
SNCB-204ENST00000508006 STRIP1Q5VSL9 837 aa27.38■■□□□ 1.97
SNCB-204ENST00000508006 USP17L1Q7RTZ2 530 aa27.38■■□□□ 1.97
SNCB-204ENST00000508006 ZNF512BQ96KM6 892 aaPredicted RBP27.38■■□□□ 1.97
SNCB-204ENST00000508006 DBNLQ9UJU6 430 aaKnown RBP27.38■■□□□ 1.97
SNCB-204ENST00000508006 ASTN2O75129 1339 aaPredicted RBP27.38■■□□□ 1.97
SNCB-204ENST00000508006 AKAP11Q9UKA4 1901 aa27.37■■□□□ 1.97
SNCB-204ENST00000508006 UQCRFS1P1P0C7P4 283 aa27.37■■□□□ 1.97
SNCB-204ENST00000508006 ANKRD45Q5TZF3 282 aa27.37■■□□□ 1.97
SNCB-204ENST00000508006 DBNDD2Q9BQY9 259 aa27.37■■□□□ 1.97
SNCB-204ENST00000508006 CCDC8Q9H0W5 538 aaPredicted RBP27.37■■□□□ 1.97
SNCB-204ENST00000508006 PDS5AQ29RF7 1337 aaKnown RBP27.37■■□□□ 1.97
SNCB-204ENST00000508006 FAM205AQ6ZU69 1335 aa27.37■■□□□ 1.97
SNCB-204ENST00000508006 SLC34A2O95436 690 aa27.36■■□□□ 1.97
SNCB-204ENST00000508006 SLC10A3P09131 477 aa27.36■■□□□ 1.97
SNCB-204ENST00000508006 USP17L8P0C7I0 530 aa27.36■■□□□ 1.97
SNCB-204ENST00000508006 ARID4AP29374 1257 aaPredicted RBP27.36■■□□□ 1.97
SNCB-204ENST00000508006 PHKA1P46020 1223 aa27.36■■□□□ 1.97
SNCB-204ENST00000508006 ZNF280AP59817 542 aaPredicted RBP27.36■■□□□ 1.97
SNCB-204ENST00000508006 FKBP1AP62942 108 aaKnown RBP27.36■■□□□ 1.97
SNCB-204ENST00000508006 CSRNP1Q96S65 589 aa27.36■■□□□ 1.97
SNCB-204ENST00000508006 DENND2AQ9ULE3 1009 aa27.36■■□□□ 1.97
SNCB-204ENST00000508006 FRAT2O75474 233 aaPredicted RBP27.35■■□□□ 1.97
SNCB-204ENST00000508006 TTLL5Q6EMB2 1281 aa27.35■■□□□ 1.97
SNCB-204ENST00000508006 REM2Q8IYK8 340 aaPredicted RBP27.35■■□□□ 1.97
SNCB-204ENST00000508006 MYOZ2Q9NPC6 264 aa27.35■■□□□ 1.97
SNCB-204ENST00000508006 MYO3BQ8WXR4 1341 aa27.35■■□□□ 1.97
SNCB-204ENST00000508006 SMARCA5O60264 1052 aaPredicted RBP27.34■■□□□ 1.97
SNCB-204ENST00000508006 NUCB1Q02818 461 aa27.34■■□□□ 1.97
SNCB-204ENST00000508006 CCDC136Q96JN2 1154 aa27.34■■□□□ 1.97
SNCB-204ENST00000508006 PPP4R2Q9NY27 417 aa27.34■■□□□ 1.97
SNCB-204ENST00000508006 TTC39AQ5SRH9 613 aa27.33■■□□□ 1.97
SNCB-204ENST00000508006 CENPQQ7L2Z9 268 aaPredicted RBP27.33■■□□□ 1.97
SNCB-204ENST00000508006 TBC1D22AQ8WUA7 517 aa27.33■■□□□ 1.97
SNCB-204ENST00000508006 MMP14P50281 582 aa27.32■■□□□ 1.96
SNCB-204ENST00000508006 FKBP1BP68106 108 aa27.32■■□□□ 1.96
SNCB-204ENST00000508006 GTF2IP78347 998 aa27.32■■□□□ 1.96
SNCB-204ENST00000508006 DACT2Q5SW24 774 aa27.32■■□□□ 1.96
SNCB-204ENST00000508006 TLR7Q9NYK1 1049 aaKnown RBP27.32■■□□□ 1.96
SNCB-204ENST00000508006 CHD1LQ86WJ1 897 aa27.31■■□□□ 1.96
SNCB-204ENST00000508006 WDR66Q8TBY9 1149 aa27.31■■□□□ 1.96
SNCB-204ENST00000508006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.31■■□□□ 1.96
SNCB-204ENST00000508006 GPATCH3Q96I76 525 aa27.31■■□□□ 1.96
SNCB-204ENST00000508006 FBXW7Q969H0 707 aa27.3■■□□□ 1.96
SNCB-204ENST00000508006 RASGRF1Q13972 1273 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 TTLL12Q14166 644 aaPredicted RBP27.29■■□□□ 1.96
SNCB-204ENST00000508006 B4GALNT3Q6L9W6 998 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 RASAL3Q86YV0 1011 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 OGFOD1Q8N543 542 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 GMLQ99445 158 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 IQSEC3Q9UPP2 1182 aaPredicted RBP27.29■■□□□ 1.96
SNCB-204ENST00000508006 SUGT1Q9Y2Z0 365 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 TTC41PQ6P2S7 1318 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 PITPNM2Q9BZ72 1349 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 SALL1Q9NSC2 1324 aa27.29■■□□□ 1.96
SNCB-204ENST00000508006 IGSF3O75054 1194 aa27.28■■□□□ 1.96
SNCB-204ENST00000508006 ZGPATQ8N5A5 531 aaKnown RBP27.28■■□□□ 1.96
SNCB-204ENST00000508006 ECHDC1Q9NTX5 307 aa27.28■■□□□ 1.96
SNCB-204ENST00000508006 SCAF8Q9UPN6 1271 aaKnown RBP27.28■■□□□ 1.96
SNCB-204ENST00000508006 ATP5JP18859 108 aa27.27■■□□□ 1.96
SNCB-204ENST00000508006 CTU1Q7Z7A3 348 aaKnown RBP27.27■■□□□ 1.96
SNCB-204ENST00000508006 SPATA5Q8NB90 893 aa27.27■■□□□ 1.96
SNCB-204ENST00000508006 HMG20BQ9P0W2 317 aa27.27■■□□□ 1.96
SNCB-204ENST00000508006 COL1A1P02452 1464 aaPredicted RBP27.26■■□□□ 1.95
SNCB-204ENST00000508006 MCAMP43121 646 aa27.26■■□□□ 1.95
SNCB-204ENST00000508006 SOX10P56693 466 aa27.26■■□□□ 1.95
SNCB-204ENST00000508006 MFSD14BQ5SR56 506 aa27.26■■□□□ 1.95
SNCB-204ENST00000508006 LNPKQ9C0E8 428 aa27.26■■□□□ 1.95
SNCB-204ENST00000508006 SALL3Q9BXA9 1300 aa27.25■■□□□ 1.95
SNCB-204ENST00000508006 UBE2Q2LH0YL09 131 aa27.25■■□□□ 1.95
SNCB-204ENST00000508006 NF2P35240 595 aa27.25■■□□□ 1.95
SNCB-204ENST00000508006 CHAF1AQ13111 956 aaPredicted RBP27.25■■□□□ 1.95
SNCB-204ENST00000508006 NBPF9Q3BBW0 867 aa27.25■■□□□ 1.95
SNCB-204ENST00000508006 PRAMEF18Q5VWM3 479 aa27.25■■□□□ 1.95
SNCB-204ENST00000508006 MOB2Q70IA6 237 aa27.25■■□□□ 1.95
SNCB-204ENST00000508006 BCL11AQ9H165 835 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms