RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
DDR1-260ENST00000507533 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
DDR1-260ENST00000507533 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
DDR1-260ENST00000507533 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 GJA8P48165 433 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 TNNI2P48788 182 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.44
DDR1-260ENST00000507533 GCKRQ14397 625 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 UBE2Q1Q7Z7E8 422 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 SRRDQ9UH36 339 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.44
DDR1-260ENST00000507533 TTF2Q9UNY4 1162 aaKnown RBP17.77■□□□□ 0.44
DDR1-260ENST00000507533 OTOFQ9HC10 1997 aa17.77■□□□□ 0.43
DDR1-260ENST00000507533 MYH3P11055 1940 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
DDR1-260ENST00000507533 GJB1P08034 283 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 CCL5P13501 91 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 GRK4P32298 578 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 PSMC4P43686 418 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 CASP7P55210 303 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 DZIP1LQ8IYY4 767 aaKnown RBP17.76■□□□□ 0.43
DDR1-260ENST00000507533 RAET1EQ8TD07 263 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 COL6A3P12111 3177 aa17.76■□□□□ 0.43
DDR1-260ENST00000507533 A0A1W2PPC1 479 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 HOXD10P28358 340 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 CTGFP29279 349 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 MFSD14BQ5SR56 506 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 C17orf99Q6UX52 265 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 ERO1BQ86YB8 467 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 STK31Q9BXU1 1019 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 CPA4Q9UI42 421 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 RIPOR2Q9Y4F9 1068 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 SNCAIPQ9Y6H5 919 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 ZSWIM8A7E2V4 1837 aa17.75■□□□□ 0.43
DDR1-260ENST00000507533 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
DDR1-260ENST00000507533 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
DDR1-260ENST00000507533 IRF6O14896 467 aa17.74■□□□□ 0.43
DDR1-260ENST00000507533 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
DDR1-260ENST00000507533 OSBPP22059 807 aa17.74■□□□□ 0.43
DDR1-260ENST00000507533 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
DDR1-260ENST00000507533 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
DDR1-260ENST00000507533 PLIN1O60240 522 aa17.73■□□□□ 0.43
DDR1-260ENST00000507533 MNX1P50219 401 aaPredicted RBP17.73■□□□□ 0.43
DDR1-260ENST00000507533 IFIT5Q13325 482 aaKnown RBP17.73■□□□□ 0.43
DDR1-260ENST00000507533 G2E3Q7L622 706 aa17.73■□□□□ 0.43
DDR1-260ENST00000507533 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
DDR1-260ENST00000507533 LRCH3Q96II8 777 aa17.73■□□□□ 0.43
DDR1-260ENST00000507533 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
DDR1-260ENST00000507533 FARP2O94887 1054 aaPredicted RBP17.72■□□□□ 0.43
DDR1-260ENST00000507533 CRKP46108 304 aa17.72■□□□□ 0.43
DDR1-260ENST00000507533 UBXN2AP68543 259 aa17.72■□□□□ 0.43
DDR1-260ENST00000507533 PPIL2Q13356 520 aa17.72■□□□□ 0.43
DDR1-260ENST00000507533 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
DDR1-260ENST00000507533 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
DDR1-260ENST00000507533 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
DDR1-260ENST00000507533 APAF1O14727 1248 aa17.71■□□□□ 0.43
DDR1-260ENST00000507533 TDRD7Q8NHU6 1098 aaKnown RBP17.71■□□□□ 0.43
DDR1-260ENST00000507533 U2AF1L4Q8WU68 220 aaKnown RBP17.71■□□□□ 0.43
DDR1-260ENST00000507533 EVI5O60447 810 aa17.7■□□□□ 0.42
DDR1-260ENST00000507533 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
DDR1-260ENST00000507533 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
DDR1-260ENST00000507533 PDHXO00330 501 aa17.69■□□□□ 0.42
DDR1-260ENST00000507533 CACNB3P54284 484 aa17.69■□□□□ 0.42
DDR1-260ENST00000507533 FOXO4P98177 505 aa17.69■□□□□ 0.42
DDR1-260ENST00000507533 PPATQ06203 517 aa17.69■□□□□ 0.42
DDR1-260ENST00000507533 ANKRD23Q86SG2 305 aa17.69■□□□□ 0.42
DDR1-260ENST00000507533 SGPL1O95470 568 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 HIBADHP31937 336 aaKnown RBP17.68■□□□□ 0.42
DDR1-260ENST00000507533 GYG1P46976 350 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
DDR1-260ENST00000507533 LINS1Q8NG48 757 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 HOOK2Q96ED9 719 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 ZNF594Q96JF6 807 aaPredicted RBP17.68■□□□□ 0.42
DDR1-260ENST00000507533 UNC93B1Q9H1C4 597 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
DDR1-260ENST00000507533 PRKCZQ05513 592 aa17.67■□□□□ 0.42
DDR1-260ENST00000507533 GRIK5Q16478 980 aa17.67■□□□□ 0.42
DDR1-260ENST00000507533 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
DDR1-260ENST00000507533 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
DDR1-260ENST00000507533 DNAAF4Q8WXU2 420 aa17.67■□□□□ 0.42
DDR1-260ENST00000507533 ADGRA2Q96PE1 1338 aa17.67■□□□□ 0.42
DDR1-260ENST00000507533 CUL9Q8IWT3 2517 aa17.66■□□□□ 0.42
DDR1-260ENST00000507533 TFRCP02786 760 aaKnown RBP17.66■□□□□ 0.42
DDR1-260ENST00000507533 FLIIQ13045 1269 aa17.66■□□□□ 0.42
DDR1-260ENST00000507533 CCDC57Q2TAC2 916 aa17.66■□□□□ 0.42
DDR1-260ENST00000507533 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
DDR1-260ENST00000507533 LMBR1LQ6UX01 489 aa17.66■□□□□ 0.42
DDR1-260ENST00000507533 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
DDR1-260ENST00000507533 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
DDR1-260ENST00000507533 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
DDR1-260ENST00000507533 ARAP2Q8WZ64 1704 aa17.65■□□□□ 0.42
DDR1-260ENST00000507533 FCGRTP55899 365 aa17.65■□□□□ 0.42
DDR1-260ENST00000507533 HDLBPQ00341 1268 aaKnown RBP17.65■□□□□ 0.42
DDR1-260ENST00000507533 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
DDR1-260ENST00000507533 UBE4AQ14139 1066 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms