RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
POLR2J3-212ENST00000507355 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
POLR2J3-212ENST00000507355 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-212ENST00000507355 RASA3Q14644 834 aa16.94■□□□□ 0.3
POLR2J3-212ENST00000507355 SLC9C1Q4G0N8 1177 aa16.94■□□□□ 0.3
POLR2J3-212ENST00000507355 OPTNQ96CV9 577 aa16.94■□□□□ 0.3
POLR2J3-212ENST00000507355 PTCH2Q9Y6C5 1203 aa16.94■□□□□ 0.3
POLR2J3-212ENST00000507355 UNCXA6NJT0 531 aa16.93■□□□□ 0.3
POLR2J3-212ENST00000507355 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-212ENST00000507355 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
POLR2J3-212ENST00000507355 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
POLR2J3-212ENST00000507355 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-212ENST00000507355 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
POLR2J3-212ENST00000507355 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
POLR2J3-212ENST00000507355 ZSWIM8A7E2V4 1837 aa16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 NBPF7P0C2Y1 421 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 UBE4AQ14139 1066 aa16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 TAF1CQ15572 869 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 TDRD7Q8NHU6 1098 aaKnown RBP16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
POLR2J3-212ENST00000507355 SZT2Q5T011 3432 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 CCL15-CCL14A0A0B4J2E2 113 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 H0YGN5 161 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 GYG1P46976 350 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 CCL15Q16663 113 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 MS4A4AQ96JQ5 239 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 FAM84BQ96KN1 310 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 ZNF521Q96K83 1311 aa16.9■□□□□ 0.3
POLR2J3-212ENST00000507355 SH3TC2Q8TF17 1288 aa16.89■□□□□ 0.29
POLR2J3-212ENST00000507355 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
POLR2J3-212ENST00000507355 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
POLR2J3-212ENST00000507355 UTYO14607 1347 aa16.89■□□□□ 0.29
POLR2J3-212ENST00000507355 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 VGLL4Q14135 290 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 ARHGEF6Q15052 776 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 ARHGAP39Q9C0H5 1083 aa16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 TDRD3Q9H7E2 651 aaKnown RBP16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 ZNF70Q9UC06 446 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-212ENST00000507355 TCP10L2B9ZVM9 353 aa16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 GTF2A2P52657 109 aa16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
POLR2J3-212ENST00000507355 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-212ENST00000507355 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
POLR2J3-212ENST00000507355 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
POLR2J3-212ENST00000507355 TMEM39BQ9GZU3 492 aa16.86■□□□□ 0.29
POLR2J3-212ENST00000507355 CSADQ9Y600 493 aa16.86■□□□□ 0.29
POLR2J3-212ENST00000507355 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
POLR2J3-212ENST00000507355 FBXO33Q7Z6M2 555 aa16.85■□□□□ 0.29
POLR2J3-212ENST00000507355 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
POLR2J3-212ENST00000507355 TEPSINQ96N21 525 aa16.85■□□□□ 0.29
POLR2J3-212ENST00000507355 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
POLR2J3-212ENST00000507355 IQSEC3Q9UPP2 1182 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-212ENST00000507355 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-212ENST00000507355 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 KIF22Q14807 665 aa16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 SSH1Q8WYL5 1049 aa16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 PTPRCP08575 1304 aa16.84■□□□□ 0.29
POLR2J3-212ENST00000507355 E9PSI1 815 aa16.83■□□□□ 0.28
POLR2J3-212ENST00000507355 WDHD1O75717 1129 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-212ENST00000507355 CRKP46108 304 aa16.83■□□□□ 0.28
POLR2J3-212ENST00000507355 GRIK5Q16478 980 aa16.83■□□□□ 0.28
POLR2J3-212ENST00000507355 DPF3Q92784 378 aa16.83■□□□□ 0.28
POLR2J3-212ENST00000507355 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
POLR2J3-212ENST00000507355 FRAT2O75474 233 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 PDE8BO95263 885 aa16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 TNNI2P48788 182 aa16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 CACNB3P54284 484 aa16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
POLR2J3-212ENST00000507355 BTBD19C9JJ37 291 aa16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 TLR2O60603 784 aa16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 CETPP11597 493 aa16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 BCAMP50895 628 aa16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 SNCAIPQ9Y6H5 919 aa16.81■□□□□ 0.28
POLR2J3-212ENST00000507355 SPDYE5A6NIY4 337 aa16.8■□□□□ 0.28
POLR2J3-212ENST00000507355 MTFR1Q15390 333 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms