RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TCRBV5S4A2TA0A5A2 114 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 F8W031 263 aaPredicted RBP17.15■□□□□ 0.34
RNF4-208ENST00000507247 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
RNF4-208ENST00000507247 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
RNF4-208ENST00000507247 SLC9C2Q5TAH2 1124 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 GMLQ99445 158 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNF4-208ENST00000507247 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
RNF4-208ENST00000507247 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
RNF4-208ENST00000507247 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 C8orf34Q49A92 452 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 ADGRA1Q86SQ6 560 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
RNF4-208ENST00000507247 KIAA0825Q8IV33 1275 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 IL25Q9H293 177 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
RNF4-208ENST00000507247 ZFYP08048 801 aaPredicted RBP17.13■□□□□ 0.33
RNF4-208ENST00000507247 TNIP1Q15025 636 aa17.13■□□□□ 0.33
RNF4-208ENST00000507247 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
RNF4-208ENST00000507247 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
RNF4-208ENST00000507247 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
RNF4-208ENST00000507247 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
RNF4-208ENST00000507247 TICAM2Q86XR7 235 aa17.13■□□□□ 0.33
RNF4-208ENST00000507247 ZNF526Q8TF50 670 aaPredicted RBP17.13■□□□□ 0.33
RNF4-208ENST00000507247 SEC62Q99442 399 aaKnown RBP17.13■□□□□ 0.33
RNF4-208ENST00000507247 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
RNF4-208ENST00000507247 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
RNF4-208ENST00000507247 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 HIP1O00291 1037 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 CYP7A1P22680 504 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 SCNN1DP51172 638 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
RNF4-208ENST00000507247 CWC27Q6UX04 472 aaKnown RBP17.12■□□□□ 0.33
RNF4-208ENST00000507247 AGBL3Q8NEM8 1001 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 APPBP2Q92624 585 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 GJA3Q9Y6H8 435 aa17.12■□□□□ 0.33
RNF4-208ENST00000507247 M0R2C6 588 aa17.11■□□□□ 0.33
RNF4-208ENST00000507247 IGSF3O75054 1194 aa17.11■□□□□ 0.33
RNF4-208ENST00000507247 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
RNF4-208ENST00000507247 MAST3O60307 1309 aa17.11■□□□□ 0.33
RNF4-208ENST00000507247 ECM29Q5VYK3 1845 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 SHTN1A0MZ66 631 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
RNF4-208ENST00000507247 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 GPC2Q8N158 579 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 HELLSQ9NRZ9 838 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 GAKO14976 1311 aa17.1■□□□□ 0.33
RNF4-208ENST00000507247 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
RNF4-208ENST00000507247 SGSM2O43147 1006 aa17.09■□□□□ 0.33
RNF4-208ENST00000507247 DDNO94850 711 aaPredicted RBP17.09■□□□□ 0.33
RNF4-208ENST00000507247 RPS12P25398 132 aaKnown RBP17.09■□□□□ 0.33
RNF4-208ENST00000507247 GSTO1P78417 241 aa17.09■□□□□ 0.33
RNF4-208ENST00000507247 ZNF589Q86UQ0 364 aaPredicted RBP17.09■□□□□ 0.33
RNF4-208ENST00000507247 MIGA1Q8NAN2 632 aa17.09■□□□□ 0.33
RNF4-208ENST00000507247 ESYT1Q9BSJ8 1104 aa17.09■□□□□ 0.33
RNF4-208ENST00000507247 DAGLAQ9Y4D2 1042 aa17.09■□□□□ 0.33
RNF4-208ENST00000507247 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
RNF4-208ENST00000507247 FOCADQ5VW36 1801 aa17.08■□□□□ 0.33
RNF4-208ENST00000507247 RAD50Q92878 1312 aa17.08■□□□□ 0.32
RNF4-208ENST00000507247 LDHCP07864 332 aa17.08■□□□□ 0.32
RNF4-208ENST00000507247 CRKP46108 304 aa17.08■□□□□ 0.32
RNF4-208ENST00000507247 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.32
RNF4-208ENST00000507247 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.32
RNF4-208ENST00000507247 MCMDC2Q4G0Z9 681 aa17.08■□□□□ 0.32
RNF4-208ENST00000507247 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.32
RNF4-208ENST00000507247 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
RNF4-208ENST00000507247 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
RNF4-208ENST00000507247 FAM163AQ96GL9 167 aaPredicted RBP17.08■□□□□ 0.32
RNF4-208ENST00000507247 MBD4O95243 580 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 BTDP43251 543 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 LCORLQ8N3X6 602 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 DPF2Q92785 391 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 TEKT1Q969V4 418 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
RNF4-208ENST00000507247 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
RNF4-208ENST00000507247 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
RNF4-208ENST00000507247 CCDC171Q6TFL3 1326 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 GPR75-ASB3A0A0A6YYF3 556 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 GPAA1O43292 621 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 SEC24BO95487 1268 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
RNF4-208ENST00000507247 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
RNF4-208ENST00000507247 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
RNF4-208ENST00000507247 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
RNF4-208ENST00000507247 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms