RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ZNF804BA4D1E1 1349 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.22
GYPB-208ENST00000507009 MANSC4A6NHS7 340 aaPredicted RBP7.39□□□□□ -1.23
GYPB-208ENST00000507009 SNAP23O00161 211 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
GYPB-208ENST00000507009 APAF1O14727 1248 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
GYPB-208ENST00000507009 PLIN1O60240 522 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 ALDH1A1P00352 501 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 IGKV5-2P06315 115 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 EN2P19622 333 aaPredicted RBP7.39□□□□□ -1.23
GYPB-208ENST00000507009 GNAI1P63096 354 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
GYPB-208ENST00000507009 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 ZSWIM6Q9HCJ5 1215 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
GYPB-208ENST00000507009 MYO1BO43795 1136 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 TAF5LO75529 589 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 ITGA6P23229 1130 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 CRHR2Q13324 411 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 CFAP100Q494V2 611 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 VARS2Q5ST30 1063 aaKnown RBP7.38□□□□□ -1.23
GYPB-208ENST00000507009 LDLRAD1Q5T700 205 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
GYPB-208ENST00000507009 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 TSPYL6Q8N831 410 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 TSR2Q969E8 191 aaKnown RBP7.38□□□□□ -1.23
GYPB-208ENST00000507009 ERO1AQ96HE7 468 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 STK31Q9BXU1 1019 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 ANKRD2Q9GZV1 360 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 IFT57Q9NWB7 429 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 LEMD3Q9Y2U8 911 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 ECM29Q5VYK3 1845 aa7.38□□□□□ -1.23
GYPB-208ENST00000507009 SSC5DA1L4H1 1573 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 ZNF853P0CG23 659 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 GJA5P36382 358 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 IREB2P48200 963 aaKnown RBP7.37□□□□□ -1.23
GYPB-208ENST00000507009 INHBEP58166 350 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 CALD1Q05682 793 aaKnown RBP7.37□□□□□ -1.23
GYPB-208ENST00000507009 CHRNDQ07001 517 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 SLC4A8Q2Y0W8 1093 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 NOM1Q5C9Z4 860 aaKnown RBP7.37□□□□□ -1.23
GYPB-208ENST00000507009 INTS3Q68E01 1043 aaKnown RBP7.37□□□□□ -1.23
GYPB-208ENST00000507009 OTUD7BQ6GQQ9 843 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 GPR153Q6NV75 609 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 G2E3Q7L622 706 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 CERS5Q8N5B7 392 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 CD209Q9NNX6 404 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
GYPB-208ENST00000507009 AOX1Q06278 1338 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 ANKRD18BA2A2Z9 1011 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
GYPB-208ENST00000507009 SP3Q02447 781 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 SUPT20HL1Q3ZLR7 823 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 SLC9C1Q4G0N8 1177 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 TAF7LQ5H9L4 462 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 ZNF804AQ7Z570 1209 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 OPTNQ96CV9 577 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 PRMT6Q96LA8 375 aaPredicted RBP7.36□□□□□ -1.23
GYPB-208ENST00000507009 CFHR5Q9BXR6 569 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 OTOFQ9HC10 1997 aa7.36□□□□□ -1.23
GYPB-208ENST00000507009 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
GYPB-208ENST00000507009 TCP10L2B9ZVM9 353 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 H7C1W4 665 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 USP2O75604 605 aaPredicted RBP7.35□□□□□ -1.23
GYPB-208ENST00000507009 CAP1Q01518 475 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 FKBP5Q13451 457 aaPredicted RBP7.35□□□□□ -1.23
GYPB-208ENST00000507009 RASA3Q14644 834 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
GYPB-208ENST00000507009 ARSIQ5FYB1 569 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 ANKRD13AQ8IZ07 590 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 SH3TC2Q8TF17 1288 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 ZBED3Q96IU2 234 aaPredicted RBP7.35□□□□□ -1.23
GYPB-208ENST00000507009 PTPN18Q99952 460 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 TDRD3Q9H7E2 651 aaKnown RBP7.35□□□□□ -1.23
GYPB-208ENST00000507009 PPP2R3BQ9Y5P8 575 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 PTCH2Q9Y6C5 1203 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 ZSWIM8A7E2V4 1837 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 A0A1B0GUL6 1792 aa7.35□□□□□ -1.23
GYPB-208ENST00000507009 RBBP6Q7Z6E9 1792 aaKnown RBP7.35□□□□□ -1.23
GYPB-208ENST00000507009 CCL15-CCL14A0A0B4J2E2 113 aa7.34□□□□□ -1.23
GYPB-208ENST00000507009 MMP14P50281 582 aa7.34□□□□□ -1.23
GYPB-208ENST00000507009 FXR1P51114 621 aaKnown RBP eCLIP7.34□□□□□ -1.23
GYPB-208ENST00000507009 IFIT5Q13325 482 aaKnown RBP7.34□□□□□ -1.23
GYPB-208ENST00000507009 GCKRQ14397 625 aa7.34□□□□□ -1.23
GYPB-208ENST00000507009 CCL15Q16663 113 aa7.34□□□□□ -1.23
GYPB-208ENST00000507009 TWISTNBQ3B726 338 aaPredicted RBP7.34□□□□□ -1.23
GYPB-208ENST00000507009 ZNF594Q96JF6 807 aaPredicted RBP7.34□□□□□ -1.23
GYPB-208ENST00000507009 CHMP4AQ9BY43 222 aa7.34□□□□□ -1.23
GYPB-208ENST00000507009 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
GYPB-208ENST00000507009 C2orf72A6NCS6 295 aa7.33□□□□□ -1.24
GYPB-208ENST00000507009 H0YGN5 161 aa7.33□□□□□ -1.24
GYPB-208ENST00000507009 CACNB3P54284 484 aa7.33□□□□□ -1.24
GYPB-208ENST00000507009 FLIIQ13045 1269 aa7.33□□□□□ -1.24
GYPB-208ENST00000507009 CHAF1AQ13111 956 aaPredicted RBP7.33□□□□□ -1.24
GYPB-208ENST00000507009 MAP3K11Q16584 847 aa7.33□□□□□ -1.24
GYPB-208ENST00000507009 NBPF11Q86T75 865 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms