RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 UQCRFS1P1P0C7P4 283 aa24.39■■□□□ 1.49
SNX25-204ENST00000506896 ECE1P42892 770 aa24.39■■□□□ 1.49
SNX25-204ENST00000506896 CCDC158Q5M9N0 1113 aa24.39■■□□□ 1.49
SNX25-204ENST00000506896 CLASRPQ8N2M8 674 aaKnown RBP24.39■■□□□ 1.49
SNX25-204ENST00000506896 GBA2Q9HCG7 927 aaPredicted RBP24.39■■□□□ 1.49
SNX25-204ENST00000506896 PCDHB15Q9Y5E8 787 aa24.39■■□□□ 1.49
SNX25-204ENST00000506896 SALL1Q9NSC2 1324 aa24.38■■□□□ 1.49
SNX25-204ENST00000506896 ARID4AP29374 1257 aaPredicted RBP24.38■■□□□ 1.49
SNX25-204ENST00000506896 RASGRF1Q13972 1273 aa24.38■■□□□ 1.49
SNX25-204ENST00000506896 ZGPATQ8N5A5 531 aaKnown RBP24.38■■□□□ 1.49
SNX25-204ENST00000506896 EAF2Q96CJ1 260 aaPredicted RBP24.38■■□□□ 1.49
SNX25-204ENST00000506896 WBP1LQ9NX94 342 aa24.38■■□□□ 1.49
SNX25-204ENST00000506896 TTF2Q9UNY4 1162 aaKnown RBP24.38■■□□□ 1.49
SNX25-204ENST00000506896 SCAF8Q9UPN6 1271 aaKnown RBP24.38■■□□□ 1.49
SNX25-204ENST00000506896 COL1A1P02452 1464 aaPredicted RBP24.38■■□□□ 1.49
SNX25-204ENST00000506896 ECM29Q5VYK3 1845 aa24.38■■□□□ 1.49
SNX25-204ENST00000506896 MAST3O60307 1309 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 THSD7BQ9C0I4 1608 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 HDLBPQ00341 1268 aaKnown RBP24.37■■□□□ 1.49
SNX25-204ENST00000506896 DLGAP5Q15398 846 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 C2orf69Q8N8R5 385 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 ZNF512BQ96KM6 892 aaPredicted RBP24.37■■□□□ 1.49
SNX25-204ENST00000506896 DBNDD2Q9BQY9 259 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 SERPINA10Q9UK55 444 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 PCDHAC2Q9Y5I4 1007 aa24.37■■□□□ 1.49
SNX25-204ENST00000506896 HUNKP57058 714 aa24.36■■□□□ 1.49
SNX25-204ENST00000506896 CFAP100Q494V2 611 aa24.36■■□□□ 1.49
SNX25-204ENST00000506896 TTC39AQ5SRH9 613 aa24.36■■□□□ 1.49
SNX25-204ENST00000506896 AACSQ86V21 672 aa24.36■■□□□ 1.49
SNX25-204ENST00000506896 PRMT6Q96LA8 375 aaPredicted RBP24.36■■□□□ 1.49
SNX25-204ENST00000506896 DCTPP1Q9H773 170 aa24.36■■□□□ 1.49
SNX25-204ENST00000506896 IL1RAPL2Q9NP60 686 aa24.36■■□□□ 1.49
SNX25-204ENST00000506896 DBNLQ9UJU6 430 aaKnown RBP24.36■■□□□ 1.49
SNX25-204ENST00000506896 APBB1O00213 710 aa24.35■■□□□ 1.49
SNX25-204ENST00000506896 PAXIP1Q6ZW49 1069 aaPredicted RBP24.35■■□□□ 1.49
SNX25-204ENST00000506896 MRIQ9BWK5 157 aa24.35■■□□□ 1.49
SNX25-204ENST00000506896 LRRCC1Q9C099 1032 aa24.35■■□□□ 1.49
SNX25-204ENST00000506896 CCDC8Q9H0W5 538 aaPredicted RBP24.35■■□□□ 1.49
SNX25-204ENST00000506896 SPDYE2BA6NHP3 402 aa24.34■■□□□ 1.49
SNX25-204ENST00000506896 SPDYE6P0CI01 402 aa24.34■■□□□ 1.49
SNX25-204ENST00000506896 MAP2K2P36507 400 aa24.34■■□□□ 1.49
SNX25-204ENST00000506896 GRIK5Q16478 980 aa24.34■■□□□ 1.49
SNX25-204ENST00000506896 SPATA5Q8NB90 893 aa24.34■■□□□ 1.49
SNX25-204ENST00000506896 MYO1BO43795 1136 aa24.33■■□□□ 1.49
SNX25-204ENST00000506896 RBM5P52756 815 aaKnown RBP eCLIP24.33■■□□□ 1.49
SNX25-204ENST00000506896 PRAMEF18Q5VWM3 479 aa24.33■■□□□ 1.49
SNX25-204ENST00000506896 APOBEC3FQ8IUX4 373 aaKnown RBP24.33■■□□□ 1.49
SNX25-204ENST00000506896 EXOC6Q8TAG9 804 aa24.33■■□□□ 1.49
SNX25-204ENST00000506896 HMG20BQ9P0W2 317 aa24.33■■□□□ 1.49
SNX25-204ENST00000506896 AOC2O75106 756 aa24.32■■□□□ 1.48
SNX25-204ENST00000506896 LDHBP07195 334 aaKnown RBP24.32■■□□□ 1.48
SNX25-204ENST00000506896 IFIT2P09913 472 aaKnown RBP24.32■■□□□ 1.48
SNX25-204ENST00000506896 FKBP1BP68106 108 aa24.32■■□□□ 1.48
SNX25-204ENST00000506896 MAP2K1Q02750 393 aaPredicted RBP24.32■■□□□ 1.48
SNX25-204ENST00000506896 SPTY2D1Q68D10 685 aaPredicted RBP24.32■■□□□ 1.48
SNX25-204ENST00000506896 RGMBQ6NW40 437 aa24.32■■□□□ 1.48
SNX25-204ENST00000506896 TEKT1Q969V4 418 aa24.32■■□□□ 1.48
SNX25-204ENST00000506896 TLR7Q9NYK1 1049 aaKnown RBP24.32■■□□□ 1.48
SNX25-204ENST00000506896 AOX1Q06278 1338 aa24.32■■□□□ 1.48
SNX25-204ENST00000506896 FOXN1O15353 648 aa24.31■■□□□ 1.48
SNX25-204ENST00000506896 MCAMP43121 646 aa24.31■■□□□ 1.48
SNX25-204ENST00000506896 CRKP46108 304 aa24.31■■□□□ 1.48
SNX25-204ENST00000506896 GRM1Q13255 1194 aa24.31■■□□□ 1.48
SNX25-204ENST00000506896 HDAC1Q13547 482 aaPredicted RBP24.31■■□□□ 1.48
SNX25-204ENST00000506896 PRDX5P30044 214 aa24.3■■□□□ 1.48
SNX25-204ENST00000506896 HHIPL2Q6UWX4 724 aa24.3■■□□□ 1.48
SNX25-204ENST00000506896 PAPPA2Q9BXP8 1791 aa24.29■■□□□ 1.48
SNX25-204ENST00000506896 FAM155AB1AL88 458 aaPredicted RBP24.29■■□□□ 1.48
SNX25-204ENST00000506896 COL13A1Q5TAT6 717 aaPredicted RBP24.29■■□□□ 1.48
SNX25-204ENST00000506896 DEFB129Q9H1M3 183 aa24.29■■□□□ 1.48
SNX25-204ENST00000506896 ABCF2Q9UG63 623 aa24.29■■□□□ 1.48
SNX25-204ENST00000506896 IGSF3O75054 1194 aa24.28■■□□□ 1.48
SNX25-204ENST00000506896 SLF2Q8IX21 1173 aa24.28■■□□□ 1.48
SNX25-204ENST00000506896 ZDHHC15Q96MV8 337 aa24.28■■□□□ 1.48
SNX25-204ENST00000506896 NOGQ13253 232 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 PI16Q6UXB8 463 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 MOB2Q70IA6 237 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 ERICH6Q7L0X2 663 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 DZIP1Q86YF9 867 aaKnown RBP24.27■■□□□ 1.48
SNX25-204ENST00000506896 CCDC102AQ96A19 550 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 GCC1Q96CN9 775 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 ZIC5Q96T25 663 aa24.27■■□□□ 1.48
SNX25-204ENST00000506896 CLRN2A0PK11 232 aa24.26■■□□□ 1.47
SNX25-204ENST00000506896 ZNF157P51786 506 aaPredicted RBP24.26■■□□□ 1.47
SNX25-204ENST00000506896 SPDYE2Q495Y8 402 aa24.26■■□□□ 1.47
SNX25-204ENST00000506896 AIDAQ96BJ3 306 aa24.26■■□□□ 1.47
SNX25-204ENST00000506896 RWDD1Q9H446 243 aaPredicted RBP24.26■■□□□ 1.47
SNX25-204ENST00000506896 PPP2R3BQ9Y5P8 575 aa24.26■■□□□ 1.47
SNX25-204ENST00000506896 NF2P35240 595 aa24.25■■□□□ 1.47
SNX25-204ENST00000506896 CTCFP49711 727 aaPredicted RBP24.25■■□□□ 1.47
SNX25-204ENST00000506896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.25■■□□□ 1.47
SNX25-204ENST00000506896 TDRD3Q9H7E2 651 aaKnown RBP24.25■■□□□ 1.47
SNX25-204ENST00000506896 SNRKQ9NRH2 765 aa24.25■■□□□ 1.47
SNX25-204ENST00000506896 ZNF70Q9UC06 446 aaPredicted RBP24.25■■□□□ 1.47
SNX25-204ENST00000506896 AKAP11Q9UKA4 1901 aa24.25■■□□□ 1.47
SNX25-204ENST00000506896 UBE2Q2LH0YL09 131 aa24.24■■□□□ 1.47
SNX25-204ENST00000506896 SMARCA5O60264 1052 aaPredicted RBP24.24■■□□□ 1.47
SNX25-204ENST00000506896 SLC10A3P09131 477 aa24.24■■□□□ 1.47
SNX25-204ENST00000506896 TNFAIP1Q13829 316 aa24.24■■□□□ 1.47
SNX25-204ENST00000506896 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms