RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 TTLL12Q14166 644 aaPredicted RBP13.4□□□□□ -0.26
SNCA-210ENST00000506691 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
SNCA-210ENST00000506691 ERO1AQ96HE7 468 aa13.4□□□□□ -0.26
SNCA-210ENST00000506691 C1orf115Q9H7X2 142 aa13.4□□□□□ -0.26
SNCA-210ENST00000506691 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
SNCA-210ENST00000506691 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 MOB2Q70IA6 237 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
SNCA-210ENST00000506691 CEP126Q9P2H0 1117 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
SNCA-210ENST00000506691 TESPA1A2RU30 521 aaPredicted RBP13.38□□□□□ -0.27
SNCA-210ENST00000506691 SURF6O75683 361 aaKnown RBP13.38□□□□□ -0.27
SNCA-210ENST00000506691 CHRNDQ07001 517 aa13.38□□□□□ -0.27
SNCA-210ENST00000506691 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
SNCA-210ENST00000506691 ARHGEF6Q15052 776 aa13.38□□□□□ -0.27
SNCA-210ENST00000506691 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
SNCA-210ENST00000506691 HABP4Q5JVS0 413 aaKnown RBP13.38□□□□□ -0.27
SNCA-210ENST00000506691 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
SNCA-210ENST00000506691 ZNF594Q96JF6 807 aaPredicted RBP13.38□□□□□ -0.27
SNCA-210ENST00000506691 AKAP2Q9Y2D5 859 aa13.38□□□□□ -0.27
SNCA-210ENST00000506691 MYO1BO43795 1136 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 PDE8BO95263 885 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 METTL24Q5JXM2 366 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 OTOP1Q7RTM1 612 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 SLC10A4Q96EP9 437 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 DEFB129Q9H1M3 183 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 GPR108Q9NPR9 543 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
SNCA-210ENST00000506691 KCNJ4P48050 445 aa13.36□□□□□ -0.27
SNCA-210ENST00000506691 OS9Q13438 667 aaPredicted RBP13.36□□□□□ -0.27
SNCA-210ENST00000506691 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
SNCA-210ENST00000506691 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
SNCA-210ENST00000506691 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
SNCA-210ENST00000506691 ANGEL1Q9UNK9 670 aaKnown RBP13.36□□□□□ -0.27
SNCA-210ENST00000506691 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
SNCA-210ENST00000506691 HTTP42858 3142 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 IFIT1P09914 478 aaKnown RBP13.35□□□□□ -0.27
SNCA-210ENST00000506691 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
SNCA-210ENST00000506691 PUM3Q15397 648 aaKnown RBP13.35□□□□□ -0.27
SNCA-210ENST00000506691 DLGAP5Q15398 846 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 ANKRD13AQ8IZ07 590 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 KLHDC4Q8TBB5 520 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 WNK4Q96J92 1243 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 SIL1Q9H173 461 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
SNCA-210ENST00000506691 TRIM17Q9Y577 477 aa13.35□□□□□ -0.27
SNCA-210ENST00000506691 ZBTB22O15209 634 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 SASH1O94885 1247 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 IL1R1P14778 569 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 TNFAIP1Q13829 316 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 VGLL2Q8N8G2 317 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 LPIN2Q92539 896 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 CD209Q9NNX6 404 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
SNCA-210ENST00000506691 IRS2Q9Y4H2 1338 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
SNCA-210ENST00000506691 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNCA-210ENST00000506691 GNRH1P01148 92 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 SLC5A1P13866 664 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 GTF2IP78347 998 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 IRX6P78412 446 aaPredicted RBP13.33□□□□□ -0.28
SNCA-210ENST00000506691 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 R3HDMLQ9H3Y0 253 aa13.33□□□□□ -0.28
SNCA-210ENST00000506691 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
SNCA-210ENST00000506691 FGFR2P21802 821 aa13.32□□□□□ -0.28
SNCA-210ENST00000506691 SP3Q02447 781 aa13.32□□□□□ -0.28
SNCA-210ENST00000506691 CAVIN4Q5BKX8 364 aa13.32□□□□□ -0.28
SNCA-210ENST00000506691 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
SNCA-210ENST00000506691 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
SNCA-210ENST00000506691 RHPN1Q8TCX5 695 aa13.32□□□□□ -0.28
SNCA-210ENST00000506691 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
SNCA-210ENST00000506691 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
SNCA-210ENST00000506691 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
SNCA-210ENST00000506691 TAF5LO75529 589 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 PRMT2P55345 433 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 TFCP2Q12800 502 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
SNCA-210ENST00000506691 MXD3Q9BW11 206 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 EXOC6BQ9Y2D4 811 aa13.31□□□□□ -0.28
SNCA-210ENST00000506691 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 POTEFA5A3E0 1075 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 WTIPA6NIX2 430 aaPredicted RBP13.3□□□□□ -0.28
SNCA-210ENST00000506691 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
SNCA-210ENST00000506691 CAPN2P17655 700 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 CRHR2Q13324 411 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms