RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 PAPPA2Q9BXP8 1791 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 SURF6O75683 361 aaKnown RBP19.2■□□□□ 0.66
MED28-204ENST00000506409 RGMBQ6NW40 437 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 CEP85Q6P2H3 762 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 TEKT1Q969V4 418 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 NEUROD6Q96NK8 337 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 DENND2AQ9ULE3 1009 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 THSD7BQ9C0I4 1608 aa19.2■□□□□ 0.66
MED28-204ENST00000506409 AOC2O75106 756 aa19.19■□□□□ 0.66
MED28-204ENST00000506409 MAP2K2P36507 400 aa19.19■□□□□ 0.66
MED28-204ENST00000506409 MAP2K1Q02750 393 aaPredicted RBP19.19■□□□□ 0.66
MED28-204ENST00000506409 SPDYE2Q495Y8 402 aa19.19■□□□□ 0.66
MED28-204ENST00000506409 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
MED28-204ENST00000506409 AIDAQ96BJ3 306 aa19.19■□□□□ 0.66
MED28-204ENST00000506409 TDRD3Q9H7E2 651 aaKnown RBP19.19■□□□□ 0.66
MED28-204ENST00000506409 WBP1LQ9NX94 342 aa19.19■□□□□ 0.66
MED28-204ENST00000506409 PPP2R3BQ9Y5P8 575 aa19.19■□□□□ 0.66
MED28-204ENST00000506409 ZNF157P51786 506 aaPredicted RBP19.18■□□□□ 0.66
MED28-204ENST00000506409 TTLL12Q14166 644 aaPredicted RBP19.18■□□□□ 0.66
MED28-204ENST00000506409 ZNF70Q9UC06 446 aaPredicted RBP19.18■□□□□ 0.66
MED28-204ENST00000506409 ZBTB22O15209 634 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 NOGQ13253 232 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 TNFAIP1Q13829 316 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 RASGRF1Q13972 1273 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 GORABQ5T7V8 394 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 MOB2Q70IA6 237 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 CCDC102AQ96A19 550 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 YTHDC1Q96MU7 727 aaKnown RBP19.17■□□□□ 0.66
MED28-204ENST00000506409 ZDHHC15Q96MV8 337 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
MED28-204ENST00000506409 SALL1Q9NSC2 1324 aa19.17■□□□□ 0.66
MED28-204ENST00000506409 FOXN1O15353 648 aa19.16■□□□□ 0.66
MED28-204ENST00000506409 LDHBP07195 334 aaKnown RBP19.16■□□□□ 0.66
MED28-204ENST00000506409 PRDX5P30044 214 aa19.16■□□□□ 0.66
MED28-204ENST00000506409 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
MED28-204ENST00000506409 RASA3Q14644 834 aa19.16■□□□□ 0.66
MED28-204ENST00000506409 HHIPL2Q6UWX4 724 aa19.16■□□□□ 0.66
MED28-204ENST00000506409 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
MED28-204ENST00000506409 GPR108Q9NPR9 543 aa19.16■□□□□ 0.66
MED28-204ENST00000506409 FAM155AB1AL88 458 aaPredicted RBP19.15■□□□□ 0.66
MED28-204ENST00000506409 UBE2Q2LH0YL09 131 aa19.15■□□□□ 0.66
MED28-204ENST00000506409 PRKG1Q13976 671 aa19.15■□□□□ 0.66
MED28-204ENST00000506409 C20orf194Q5TEA3 1177 aa19.15■□□□□ 0.66
MED28-204ENST00000506409 ZGPATQ8N5A5 531 aaKnown RBP19.15■□□□□ 0.66
MED28-204ENST00000506409 BEGAINQ9BUH8 593 aa19.15■□□□□ 0.66
MED28-204ENST00000506409 ZBTB40Q9NUA8 1239 aa19.15■□□□□ 0.66
MED28-204ENST00000506409 PDS5AQ29RF7 1337 aaKnown RBP19.15■□□□□ 0.66
MED28-204ENST00000506409 TCP10L2B9ZVM9 353 aa19.14■□□□□ 0.65
MED28-204ENST00000506409 SUPT20HL1Q3ZLR7 823 aa19.14■□□□□ 0.65
MED28-204ENST00000506409 TNNI3KQ59H18 835 aa19.14■□□□□ 0.65
MED28-204ENST00000506409 APOBEC3HQ6NTF7 200 aaKnown RBP19.14■□□□□ 0.65
MED28-204ENST00000506409 ARMC9Q7Z3E5 817 aa19.14■□□□□ 0.65
MED28-204ENST00000506409 TMOD2Q9NZR1 351 aa19.14■□□□□ 0.65
MED28-204ENST00000506409 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.65
MED28-204ENST00000506409 SLC10A3P09131 477 aa19.13■□□□□ 0.65
MED28-204ENST00000506409 TNNI2P48788 182 aa19.13■□□□□ 0.65
MED28-204ENST00000506409 CTCFP49711 727 aaPredicted RBP19.13■□□□□ 0.65
MED28-204ENST00000506409 DIXDC1Q155Q3 683 aa19.13■□□□□ 0.65
MED28-204ENST00000506409 ZIC5Q96T25 663 aa19.13■□□□□ 0.65
MED28-204ENST00000506409 ABCF2Q9UG63 623 aa19.13■□□□□ 0.65
MED28-204ENST00000506409 ANGEL1Q9UNK9 670 aaKnown RBP19.13■□□□□ 0.65
MED28-204ENST00000506409 SSC5DA1L4H1 1573 aa19.12■□□□□ 0.65
MED28-204ENST00000506409 PPP1R12BO60237 982 aaPredicted RBP19.12■□□□□ 0.65
MED28-204ENST00000506409 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
MED28-204ENST00000506409 CACNB3P54284 484 aa19.12■□□□□ 0.65
MED28-204ENST00000506409 NBPF12Q5TAG4 269 aaPredicted RBP19.12■□□□□ 0.65
MED28-204ENST00000506409 RASAL3Q86YV0 1011 aa19.12■□□□□ 0.65
MED28-204ENST00000506409 RPAP2Q8IXW5 612 aaPredicted RBP19.12■□□□□ 0.65
MED28-204ENST00000506409 EXOC6BQ9Y2D4 811 aa19.12■□□□□ 0.65
MED28-204ENST00000506409 DAGLAQ9Y4D2 1042 aa19.12■□□□□ 0.65
MED28-204ENST00000506409 HMMRO75330 724 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 UQCRFS1P1P0C7P4 283 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 SPTY2D1Q68D10 685 aaPredicted RBP19.11■□□□□ 0.65
MED28-204ENST00000506409 DZIP1Q86YF9 867 aaKnown RBP19.11■□□□□ 0.65
MED28-204ENST00000506409 ERC1Q8IUD2 1116 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 SPATA5Q8NB90 893 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 DBNDD2Q9BQY9 259 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 HMG20BQ9P0W2 317 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 FZD1Q9UP38 647 aa19.11■□□□□ 0.65
MED28-204ENST00000506409 KIF23Q02241 960 aaPredicted RBP19.1■□□□□ 0.65
MED28-204ENST00000506409 HSP90AB4PQ58FF6 505 aa19.1■□□□□ 0.65
MED28-204ENST00000506409 CCDC158Q5M9N0 1113 aa19.1■□□□□ 0.65
MED28-204ENST00000506409 TTC39AQ5SRH9 613 aa19.1■□□□□ 0.65
MED28-204ENST00000506409 COL13A1Q5TAT6 717 aaPredicted RBP19.1■□□□□ 0.65
MED28-204ENST00000506409 PI16Q6UXB8 463 aa19.1■□□□□ 0.65
MED28-204ENST00000506409 TMEM39BQ9GZU3 492 aa19.1■□□□□ 0.65
MED28-204ENST00000506409 MCAMP43121 646 aa19.09■□□□□ 0.65
MED28-204ENST00000506409 MAP3K11Q16584 847 aa19.09■□□□□ 0.65
MED28-204ENST00000506409 LDLRAD1Q5T700 205 aa19.09■□□□□ 0.65
MED28-204ENST00000506409 FKBP1CQ5VVH2 108 aa19.09■□□□□ 0.65
MED28-204ENST00000506409 TEPSINQ96N21 525 aa19.09■□□□□ 0.65
MED28-204ENST00000506409 CA12O43570 354 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 HSPA8P11142 646 aaKnown RBP19.08■□□□□ 0.64
MED28-204ENST00000506409 LBX1P52954 281 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 CDC42EP5Q6NZY7 148 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 FAM83AQ86UY5 434 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 CDAN1Q8IWY9 1227 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms