RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MRIQ9BWK5 157 aa20.48■□□□□ 0.87
SNCA-209ENST00000506244 POLR2AP24928 1970 aaKnown RBP20.48■□□□□ 0.87
SNCA-209ENST00000506244 TNFAIP1Q13829 316 aa20.47■□□□□ 0.87
SNCA-209ENST00000506244 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
SNCA-209ENST00000506244 SPATA5Q8NB90 893 aa20.47■□□□□ 0.87
SNCA-209ENST00000506244 DBNDD2Q9BQY9 259 aa20.47■□□□□ 0.87
SNCA-209ENST00000506244 PPP2R3BQ9Y5P8 575 aa20.47■□□□□ 0.87
SNCA-209ENST00000506244 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
SNCA-209ENST00000506244 FMR1Q06787 632 aaKnown RBP eCLIP20.46■□□□□ 0.87
SNCA-209ENST00000506244 HHIPL2Q6UWX4 724 aa20.46■□□□□ 0.87
SNCA-209ENST00000506244 AACSQ86V21 672 aa20.46■□□□□ 0.87
SNCA-209ENST00000506244 CDCA5Q96FF9 252 aa20.46■□□□□ 0.87
SNCA-209ENST00000506244 ZNF512BQ96KM6 892 aaPredicted RBP20.46■□□□□ 0.87
SNCA-209ENST00000506244 CRBNQ96SW2 442 aa20.46■□□□□ 0.87
SNCA-209ENST00000506244 RASSF10A6NK89 507 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 PRDX5P30044 214 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 NF2P35240 595 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 GRIK5Q16478 980 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 CST9Q5W186 159 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 DZIP1Q86YF9 867 aaKnown RBP20.45■□□□□ 0.86
SNCA-209ENST00000506244 SLF2Q8IX21 1173 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
SNCA-209ENST00000506244 PRMT6Q96LA8 375 aaPredicted RBP20.45■□□□□ 0.86
SNCA-209ENST00000506244 ZDHHC15Q96MV8 337 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 VEZTQ9HBM0 779 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 DBNLQ9UJU6 430 aaKnown RBP20.45■□□□□ 0.86
SNCA-209ENST00000506244 TLL2Q9Y6L7 1015 aa20.45■□□□□ 0.86
SNCA-209ENST00000506244 CEP350Q5VT06 3117 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 CLRN2A0PK11 232 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 APBB1O00213 710 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 SPDYE2Q495Y8 402 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 DNAJC5GQ8N7S2 189 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 C2orf69Q8N8R5 385 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 GBA2Q9HCG7 927 aaPredicted RBP20.44■□□□□ 0.86
SNCA-209ENST00000506244 ABCF2Q9UG63 623 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 PAPPA2Q9BXP8 1791 aa20.44■□□□□ 0.86
SNCA-209ENST00000506244 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
SNCA-209ENST00000506244 MCAMP43121 646 aa20.43■□□□□ 0.86
SNCA-209ENST00000506244 FKBP1BP68106 108 aa20.43■□□□□ 0.86
SNCA-209ENST00000506244 HHIPL1Q96JK4 782 aa20.43■□□□□ 0.86
SNCA-209ENST00000506244 LRRCC1Q9C099 1032 aa20.43■□□□□ 0.86
SNCA-209ENST00000506244 CCDC8Q9H0W5 538 aaPredicted RBP20.43■□□□□ 0.86
SNCA-209ENST00000506244 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
SNCA-209ENST00000506244 PCDHAC2Q9Y5I4 1007 aa20.43■□□□□ 0.86
SNCA-209ENST00000506244 MAST2Q6P0Q8 1798 aa20.42■□□□□ 0.86
SNCA-209ENST00000506244 TNNI2P48788 182 aa20.42■□□□□ 0.86
SNCA-209ENST00000506244 DEFB115Q30KQ5 88 aa20.42■□□□□ 0.86
SNCA-209ENST00000506244 ERICH6Q7L0X2 663 aa20.42■□□□□ 0.86
SNCA-209ENST00000506244 SAPCD2Q86UD0 394 aa20.42■□□□□ 0.86
SNCA-209ENST00000506244 DEFB129Q9H1M3 183 aa20.42■□□□□ 0.86
SNCA-209ENST00000506244 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
SNCA-209ENST00000506244 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
SNCA-209ENST00000506244 MKRN1Q9UHC7 482 aaKnown RBP20.42■□□□□ 0.86
SNCA-209ENST00000506244 IGSF3O75054 1194 aa20.41■□□□□ 0.86
SNCA-209ENST00000506244 TDRD3Q9H7E2 651 aaKnown RBP20.41■□□□□ 0.86
SNCA-209ENST00000506244 ECE1P42892 770 aa20.4■□□□□ 0.86
SNCA-209ENST00000506244 GSTO1P78417 241 aa20.4■□□□□ 0.86
SNCA-209ENST00000506244 DIXDC1Q155Q3 683 aa20.4■□□□□ 0.86
SNCA-209ENST00000506244 PI16Q6UXB8 463 aa20.4■□□□□ 0.86
SNCA-209ENST00000506244 PAXIP1Q6ZW49 1069 aaPredicted RBP20.4■□□□□ 0.86
SNCA-209ENST00000506244 DAGLAQ9Y4D2 1042 aa20.4■□□□□ 0.86
SNCA-209ENST00000506244 HUNKP57058 714 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 FKBP1CQ5VVH2 108 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 APOBEC3HQ6NTF7 200 aaKnown RBP20.39■□□□□ 0.85
SNCA-209ENST00000506244 DLK2Q6UY11 383 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 DCTPP1Q9H773 170 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 LRP2BPQ9P2M1 347 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.85
SNCA-209ENST00000506244 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 AKAP11Q9UKA4 1901 aa20.39■□□□□ 0.85
SNCA-209ENST00000506244 GAKO14976 1311 aa20.38■□□□□ 0.85
SNCA-209ENST00000506244 AOX1Q06278 1338 aa20.38■□□□□ 0.85
SNCA-209ENST00000506244 MYH2Q9UKX2 1941 aa20.38■□□□□ 0.85
SNCA-209ENST00000506244 SUPT20HL1Q3ZLR7 823 aa20.38■□□□□ 0.85
SNCA-209ENST00000506244 JMYQ8N9B5 988 aa20.38■□□□□ 0.85
SNCA-209ENST00000506244 RAI14Q9P0K7 980 aa20.38■□□□□ 0.85
SNCA-209ENST00000506244 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
SNCA-209ENST00000506244 MROH7-TTC4A0A0A0MT08 1334 aa20.37■□□□□ 0.85
SNCA-209ENST00000506244 LDHCP07864 332 aa20.37■□□□□ 0.85
SNCA-209ENST00000506244 MECOMQ03112 1051 aa20.37■□□□□ 0.85
SNCA-209ENST00000506244 RASA3Q14644 834 aa20.37■□□□□ 0.85
SNCA-209ENST00000506244 SNRKQ9NRH2 765 aa20.37■□□□□ 0.85
SNCA-209ENST00000506244 RPAP1Q9BWH6 1393 aaPredicted RBP20.36■□□□□ 0.85
SNCA-209ENST00000506244 THSD7BQ9C0I4 1608 aa20.36■□□□□ 0.85
SNCA-209ENST00000506244 TCP10L2B9ZVM9 353 aa20.36■□□□□ 0.85
SNCA-209ENST00000506244 TTLL12Q14166 644 aaPredicted RBP20.36■□□□□ 0.85
SNCA-209ENST00000506244 ARMC9Q7Z3E5 817 aa20.36■□□□□ 0.85
SNCA-209ENST00000506244 FAM83AQ86UY5 434 aa20.36■□□□□ 0.85
SNCA-209ENST00000506244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNCA-209ENST00000506244 FAM163AQ96GL9 167 aaPredicted RBP20.36■□□□□ 0.85
SNCA-209ENST00000506244 ZAP70P43403 619 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 VEGFBP49765 207 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 PRAMEF18Q5VWM3 479 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 TMED8Q6PL24 325 aaPredicted RBP20.35■□□□□ 0.85
SNCA-209ENST00000506244 TBC1D9Q6ZT07 1266 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 NSUN4Q96CB9 384 aaKnown RBP20.35■□□□□ 0.85
SNCA-209ENST00000506244 HOOK2Q96ED9 719 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 GPATCH3Q96I76 525 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms