RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 WDR66Q8TBY9 1149 aa24.4■■□□□ 1.5
SMIM20-201ENST00000506197 CNOT7Q9UIV1 285 aaKnown RBP24.4■■□□□ 1.5
SMIM20-201ENST00000506197 JAG2Q9Y219 1238 aa24.4■■□□□ 1.5
SMIM20-201ENST00000506197 ZBTB12Q9Y330 459 aaPredicted RBP24.4■■□□□ 1.5
SMIM20-201ENST00000506197 FAM205AQ6ZU69 1335 aa24.39■■□□□ 1.5
SMIM20-201ENST00000506197 USP17L3A6NCW0 530 aa24.39■■□□□ 1.49
SMIM20-201ENST00000506197 USP17L4A6NCW7 530 aa24.39■■□□□ 1.49
SMIM20-201ENST00000506197 TTLL5Q6EMB2 1281 aa24.39■■□□□ 1.49
SMIM20-201ENST00000506197 USP17L1Q7RTZ2 530 aa24.39■■□□□ 1.49
SMIM20-201ENST00000506197 TRPM4Q8TD43 1214 aa24.39■■□□□ 1.49
SMIM20-201ENST00000506197 ABT1Q9ULW3 272 aaKnown RBP24.39■■□□□ 1.49
SMIM20-201ENST00000506197 DOCK2Q92608 1830 aa24.39■■□□□ 1.49
SMIM20-201ENST00000506197 SHTN1A0MZ66 631 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 TRIM6-TRIM34B2RNG4 842 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 H7C1D1 291 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 GOLIM4O00461 696 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 TRAF5O00463 557 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 FMR1Q06787 632 aaKnown RBP eCLIP24.38■■□□□ 1.49
SMIM20-201ENST00000506197 ZGPATQ8N5A5 531 aaKnown RBP24.38■■□□□ 1.49
SMIM20-201ENST00000506197 TBC1D22AQ8WUA7 517 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 DPF2Q92785 391 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 PAG1Q9NWQ8 432 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 NDUFB9Q9Y6M9 179 aa24.38■■□□□ 1.49
SMIM20-201ENST00000506197 RASSF10A6NK89 507 aa24.37■■□□□ 1.49
SMIM20-201ENST00000506197 MAP4K4O95819 1239 aaPredicted RBP24.37■■□□□ 1.49
SMIM20-201ENST00000506197 RPS12P25398 132 aaKnown RBP24.37■■□□□ 1.49
SMIM20-201ENST00000506197 VEGFBP49765 207 aa24.37■■□□□ 1.49
SMIM20-201ENST00000506197 TTF1Q15361 905 aaPredicted RBP24.37■■□□□ 1.49
SMIM20-201ENST00000506197 STRIP1Q5VSL9 837 aa24.37■■□□□ 1.49
SMIM20-201ENST00000506197 KCNQ5Q9NR82 932 aa24.37■■□□□ 1.49
SMIM20-201ENST00000506197 HIRAP54198 1017 aaPredicted RBP24.36■■□□□ 1.49
SMIM20-201ENST00000506197 ZC3H15Q8WU90 426 aaKnown RBP24.36■■□□□ 1.49
SMIM20-201ENST00000506197 MAST2Q6P0Q8 1798 aa24.35■■□□□ 1.49
SMIM20-201ENST00000506197 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
SMIM20-201ENST00000506197 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
SMIM20-201ENST00000506197 MFSD14BQ5SR56 506 aa24.35■■□□□ 1.49
SMIM20-201ENST00000506197 ABCF2Q9UG63 623 aa24.35■■□□□ 1.49
SMIM20-201ENST00000506197 PGAP2Q9UHJ9 254 aa24.35■■□□□ 1.49
SMIM20-201ENST00000506197 SALL1Q9NSC2 1324 aa24.35■■□□□ 1.49
SMIM20-201ENST00000506197 POLR2AP24928 1970 aaKnown RBP24.34■■□□□ 1.49
SMIM20-201ENST00000506197 DACT2Q5SW24 774 aa24.34■■□□□ 1.49
SMIM20-201ENST00000506197 SPTY2D1Q68D10 685 aaPredicted RBP24.34■■□□□ 1.49
SMIM20-201ENST00000506197 RILPL2Q969X0 211 aa24.34■■□□□ 1.49
SMIM20-201ENST00000506197 EDC3Q96F86 508 aaKnown RBP24.34■■□□□ 1.49
SMIM20-201ENST00000506197 GLIS2Q9BZE0 524 aaPredicted RBP24.34■■□□□ 1.49
SMIM20-201ENST00000506197 GSPT1P15170 499 aaKnown RBP24.33■■□□□ 1.49
SMIM20-201ENST00000506197 FKBP1AP62942 108 aaKnown RBP24.33■■□□□ 1.49
SMIM20-201ENST00000506197 COL13A1Q5TAT6 717 aaPredicted RBP24.33■■□□□ 1.49
SMIM20-201ENST00000506197 TBC1D9Q6ZT07 1266 aa24.33■■□□□ 1.49
SMIM20-201ENST00000506197 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
SMIM20-201ENST00000506197 ANTXR1Q9H6X2 564 aa24.33■■□□□ 1.49
SMIM20-201ENST00000506197 LRP2BPQ9P2M1 347 aa24.33■■□□□ 1.49
SMIM20-201ENST00000506197 MYO3BQ8WXR4 1341 aa24.33■■□□□ 1.48
SMIM20-201ENST00000506197 VIL1P09327 827 aaKnown RBP24.32■■□□□ 1.48
SMIM20-201ENST00000506197 BMP2KLQ5H9B9 411 aa24.32■■□□□ 1.48
SMIM20-201ENST00000506197 CST9Q5W186 159 aa24.32■■□□□ 1.48
SMIM20-201ENST00000506197 ERICH6Q7L0X2 663 aa24.32■■□□□ 1.48
SMIM20-201ENST00000506197 SAMD7Q7Z3H4 446 aa24.32■■□□□ 1.48
SMIM20-201ENST00000506197 FSD1Q9BTV5 496 aa24.32■■□□□ 1.48
SMIM20-201ENST00000506197 THSD7BQ9C0I4 1608 aa24.32■■□□□ 1.48
SMIM20-201ENST00000506197 IDH1O75874 414 aaKnown RBP24.31■■□□□ 1.48
SMIM20-201ENST00000506197 LDHBP07195 334 aaKnown RBP24.31■■□□□ 1.48
SMIM20-201ENST00000506197 TBC1D10BQ4KMP7 808 aaPredicted RBP24.31■■□□□ 1.48
SMIM20-201ENST00000506197 RSBN1LQ6PCB5 846 aaPredicted RBP24.31■■□□□ 1.48
SMIM20-201ENST00000506197 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
SMIM20-201ENST00000506197 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.31■■□□□ 1.48
SMIM20-201ENST00000506197 PIH1D3Q9NQM4 214 aaKnown RBP24.31■■□□□ 1.48
SMIM20-201ENST00000506197 RAI14Q9P0K7 980 aa24.31■■□□□ 1.48
SMIM20-201ENST00000506197 MYH2Q9UKX2 1941 aa24.3■■□□□ 1.48
SMIM20-201ENST00000506197 CELF2O95319 508 aaKnown RBP24.3■■□□□ 1.48
SMIM20-201ENST00000506197 SDSP20132 328 aa24.3■■□□□ 1.48
SMIM20-201ENST00000506197 MAP3K12Q12852 859 aa24.3■■□□□ 1.48
SMIM20-201ENST00000506197 LRRFIP1Q32MZ4 808 aaKnown RBP24.3■■□□□ 1.48
SMIM20-201ENST00000506197 CDC37L1Q7L3B6 337 aa24.3■■□□□ 1.48
SMIM20-201ENST00000506197 MXD3Q9BW11 206 aa24.3■■□□□ 1.48
SMIM20-201ENST00000506197 SUGT1Q9Y2Z0 365 aa24.3■■□□□ 1.48
SMIM20-201ENST00000506197 WDR33Q9C0J8 1336 aaKnown RBP24.3■■□□□ 1.48
SMIM20-201ENST00000506197 EGFRP00533 1210 aa24.29■■□□□ 1.48
SMIM20-201ENST00000506197 PAXIP1Q6ZW49 1069 aaPredicted RBP24.29■■□□□ 1.48
SMIM20-201ENST00000506197 DZIP1Q86YF9 867 aaKnown RBP24.29■■□□□ 1.48
SMIM20-201ENST00000506197 TLL2Q9Y6L7 1015 aa24.29■■□□□ 1.48
SMIM20-201ENST00000506197 PRDX5P30044 214 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 KIF4BQ2VIQ3 1234 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 ZSCAN25Q6NSZ9 544 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 CERS5Q8N5B7 392 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 AGBL3Q8NEM8 1001 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 AIDAQ96BJ3 306 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 ZNF408Q9H9D4 720 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 MAST3O60307 1309 aa24.28■■□□□ 1.48
SMIM20-201ENST00000506197 IGSF3O75054 1194 aa24.27■■□□□ 1.48
SMIM20-201ENST00000506197 RBM26Q5T8P6 1007 aaKnown RBP24.27■■□□□ 1.48
SMIM20-201ENST00000506197 F8W031 263 aaPredicted RBP24.26■■□□□ 1.47
SMIM20-201ENST00000506197 FOXN1O15353 648 aa24.26■■□□□ 1.47
SMIM20-201ENST00000506197 ECE1P42892 770 aa24.26■■□□□ 1.47
SMIM20-201ENST00000506197 KIAA0825Q8IV33 1275 aa24.26■■□□□ 1.47
SMIM20-201ENST00000506197 CAPNS2Q96L46 248 aa24.26■■□□□ 1.47
SMIM20-201ENST00000506197 TTF2Q9UNY4 1162 aaKnown RBP24.26■■□□□ 1.47
SMIM20-201ENST00000506197 RFX7Q2KHR2 1363 aa24.26■■□□□ 1.47
SMIM20-201ENST00000506197 ZFYP08048 801 aaPredicted RBP24.25■■□□□ 1.47
SMIM20-201ENST00000506197 GSTO1P78417 241 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms