RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 CEP126Q9P2H0 1117 aa12.97□□□□□ -0.33
NR1I3-222ENST00000506018 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
NR1I3-222ENST00000506018 SUGT1Q9Y2Z0 365 aa12.97□□□□□ -0.33
NR1I3-222ENST00000506018 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 HDLBPQ00341 1268 aaKnown RBP12.96□□□□□ -0.33
NR1I3-222ENST00000506018 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
NR1I3-222ENST00000506018 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 PRKG1Q13976 671 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 CSRNP1Q96S65 589 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 RNF186Q9NXI6 227 aa12.96□□□□□ -0.33
NR1I3-222ENST00000506018 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
NR1I3-222ENST00000506018 LRRFIP2Q9Y608 721 aaKnown RBP12.96□□□□□ -0.33
NR1I3-222ENST00000506018 TRPA1O75762 1119 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 IL15P40933 162 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-222ENST00000506018 CRKP46108 304 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
NR1I3-222ENST00000506018 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-222ENST00000506018 BCAMP50895 628 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 INTS3Q68E01 1043 aaKnown RBP12.95□□□□□ -0.34
NR1I3-222ENST00000506018 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
NR1I3-222ENST00000506018 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 FRAT1Q92837 279 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-222ENST00000506018 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 SIL1Q9H173 461 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
NR1I3-222ENST00000506018 FGFR2P21802 821 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 ABHD8Q96I13 439 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 ZNF70Q9UC06 446 aaPredicted RBP12.94□□□□□ -0.34
NR1I3-222ENST00000506018 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 RASA3Q14644 834 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 HOOK2Q96ED9 719 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 MEIS3Q99687 375 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
NR1I3-222ENST00000506018 COPRSQ9NQ92 184 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 PCDHAC2Q9Y5I4 1007 aa12.94□□□□□ -0.34
NR1I3-222ENST00000506018 SEMA3EO15041 775 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 ZBTB48P10074 688 aaPredicted RBP12.93□□□□□ -0.34
NR1I3-222ENST00000506018 INHBEP58166 350 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 DGKZQ13574 1117 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 LDLRAD1Q5T700 205 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 ATG9AQ7Z3C6 839 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
NR1I3-222ENST00000506018 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
NR1I3-222ENST00000506018 TCP10L2B9ZVM9 353 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 GNAI2P04899 355 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 TRIM27P14373 513 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 TM4SF4P48230 202 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
NR1I3-222ENST00000506018 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
NR1I3-222ENST00000506018 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
NR1I3-222ENST00000506018 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
NR1I3-222ENST00000506018 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
NR1I3-222ENST00000506018 LAMB1P07942 1786 aa12.91□□□□□ -0.34
NR1I3-222ENST00000506018 OTUD7BQ6GQQ9 843 aa12.91□□□□□ -0.34
NR1I3-222ENST00000506018 HHIPL2Q6UWX4 724 aa12.91□□□□□ -0.34
NR1I3-222ENST00000506018 FTSJ3Q8IY81 847 aaKnown RBP12.91□□□□□ -0.34
NR1I3-222ENST00000506018 MCOLN1Q9GZU1 580 aa12.91□□□□□ -0.34
NR1I3-222ENST00000506018 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
NR1I3-222ENST00000506018 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
NR1I3-222ENST00000506018 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 CCDC85CA6NKD9 419 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 BCAR3O75815 825 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.34
NR1I3-222ENST00000506018 MTX1Q13505 466 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 FKBP1CQ5VVH2 108 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 MYH2Q9UKX2 1941 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.34
NR1I3-222ENST00000506018 USP2O75604 605 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-222ENST00000506018 G3BP1Q13283 466 aaKnown RBP eCLIP12.89□□□□□ -0.35
NR1I3-222ENST00000506018 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
NR1I3-222ENST00000506018 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
NR1I3-222ENST00000506018 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
NR1I3-222ENST00000506018 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
NR1I3-222ENST00000506018 FZD1Q9UP38 647 aa12.89□□□□□ -0.35
NR1I3-222ENST00000506018 CSADQ9Y600 493 aa12.89□□□□□ -0.35
NR1I3-222ENST00000506018 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 GRIK5Q16478 980 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
NR1I3-222ENST00000506018 GORABQ5T7V8 394 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
NR1I3-222ENST00000506018 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 AOX1Q06278 1338 aa12.88□□□□□ -0.35
NR1I3-222ENST00000506018 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms