RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SELPP16109 830 aa9.53□□□□□ -0.88
NIPBL-205ENST00000505998 DUOXA2Q1HG44 320 aa9.53□□□□□ -0.88
NIPBL-205ENST00000505998 MRRFQ96E11 262 aaKnown RBP9.53□□□□□ -0.88
NIPBL-205ENST00000505998 USP26Q9BXU7 913 aa9.53□□□□□ -0.88
NIPBL-205ENST00000505998 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
NIPBL-205ENST00000505998 KRBA1A5PL33 1030 aa9.52□□□□□ -0.89
NIPBL-205ENST00000505998 ADAM11O75078 769 aa9.52□□□□□ -0.89
NIPBL-205ENST00000505998 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
NIPBL-205ENST00000505998 LENG1Q96BZ8 264 aaPredicted RBP9.52□□□□□ -0.89
NIPBL-205ENST00000505998 NECAB3Q96P71 396 aaPredicted RBP9.52□□□□□ -0.89
NIPBL-205ENST00000505998 USP31Q70CQ4 1352 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 UNCXA6NJT0 531 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 GDF11O95390 407 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 RBM25P49756 843 aaKnown RBP9.51□□□□□ -0.89
NIPBL-205ENST00000505998 GSK3AP49840 483 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 ST13P50502 369 aaKnown RBP9.51□□□□□ -0.89
NIPBL-205ENST00000505998 NRG1Q02297 640 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-205ENST00000505998 POU4F3Q15319 338 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 CCDC85BQ15834 202 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-205ENST00000505998 SV2BQ7L1I2 683 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 TMEM151AQ8N4L1 468 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 UBASH3BQ8TF42 649 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 ZNF428Q96B54 188 aa9.51□□□□□ -0.89
NIPBL-205ENST00000505998 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
NIPBL-205ENST00000505998 ACAD11Q709F0 780 aa9.5□□□□□ -0.89
NIPBL-205ENST00000505998 CORO1BQ9BR76 489 aa9.5□□□□□ -0.89
NIPBL-205ENST00000505998 SAMM50Q9Y512 469 aa9.5□□□□□ -0.89
NIPBL-205ENST00000505998 ENC1O14682 589 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 WISP1O95388 367 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 CELA3AP09093 270 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 VAMP1P23763 118 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 MAOBP27338 520 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 TMEM87AQ8NBN3 555 aa9.49□□□□□ -0.89
NIPBL-205ENST00000505998 LOC100289279A0A1B0GTE1 492 aa9.48□□□□□ -0.89
NIPBL-205ENST00000505998 NME2P22392 152 aa9.48□□□□□ -0.89
NIPBL-205ENST00000505998 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.48□□□□□ -0.89
NIPBL-205ENST00000505998 SULF2Q8IWU5 870 aa9.48□□□□□ -0.89
NIPBL-205ENST00000505998 BACH2Q9BYV9 841 aa9.48□□□□□ -0.89
NIPBL-205ENST00000505998 NRSN2Q9GZP1 204 aa9.48□□□□□ -0.89
NIPBL-205ENST00000505998 PAGE1O75459 146 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 CHRNA4P43681 627 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 HP1BP3Q5SSJ5 553 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-205ENST00000505998 CD163Q86VB7 1156 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 RUSC1Q9BVN2 902 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 EMILIN2Q9BXX0 1053 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 AKTIPQ9H8T0 292 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
NIPBL-205ENST00000505998 KIAA1522Q9P206 1035 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-205ENST00000505998 C1QTNF9BB2RNN3 333 aa9.46□□□□□ -0.9
NIPBL-205ENST00000505998 F8W735 103 aaPredicted RBP9.46□□□□□ -0.9
NIPBL-205ENST00000505998 ARNTP27540 789 aa9.46□□□□□ -0.9
NIPBL-205ENST00000505998 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
NIPBL-205ENST00000505998 MBTPS1Q14703 1052 aa9.46□□□□□ -0.9
NIPBL-205ENST00000505998 KIAA1211Q6ZU35 1233 aa9.46□□□□□ -0.9
NIPBL-205ENST00000505998 NOC4LQ9BVI4 516 aaKnown RBP9.46□□□□□ -0.9
NIPBL-205ENST00000505998 ECEL1O95672 775 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 RECKO95980 971 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
NIPBL-205ENST00000505998 PDE3AQ14432 1141 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 PCNX4Q63HM2 1172 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 AGGF1Q8N302 714 aaeCLIP9.45□□□□□ -0.9
NIPBL-205ENST00000505998 STK35Q8TDR2 534 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 WFDC12Q8WWY7 111 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 ZC3H12CQ9C0D7 883 aaKnown RBP9.45□□□□□ -0.9
NIPBL-205ENST00000505998 RNF208Q9H0X6 261 aa9.45□□□□□ -0.9
NIPBL-205ENST00000505998 ALX3O95076 343 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 CTSBP07858 339 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 BMP6P22004 513 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
NIPBL-205ENST00000505998 LRRC14Q15048 493 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 MAP3K11Q16584 847 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 EXOSC6Q5RKV6 272 aaKnown RBP9.44□□□□□ -0.9
NIPBL-205ENST00000505998 TTBK2Q6IQ55 1244 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 KCNB2Q92953 911 aa9.44□□□□□ -0.9
NIPBL-205ENST00000505998 DLGAP3O95886 979 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 RLBP1P12271 317 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 NOS3P29474 1203 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 IREB2P48200 963 aaKnown RBP9.43□□□□□ -0.9
NIPBL-205ENST00000505998 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 LDLRAD1Q5T700 205 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 NUTM2GQ5VZR2 741 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
NIPBL-205ENST00000505998 MEGF11A6BM72 1044 aa9.42□□□□□ -0.9
NIPBL-205ENST00000505998 MAP1SQ66K74 1059 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-205ENST00000505998 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
NIPBL-205ENST00000505998 TMPRSS13Q9BYE2 586 aa9.42□□□□□ -0.9
NIPBL-205ENST00000505998 CCDC86Q9H6F5 360 aaKnown RBP9.42□□□□□ -0.9
NIPBL-205ENST00000505998 CYP4F12Q9HCS2 524 aa9.42□□□□□ -0.9
NIPBL-205ENST00000505998 RAD18Q9NS91 495 aa9.42□□□□□ -0.9
NIPBL-205ENST00000505998 CYP8B1Q9UNU6 501 aa9.42□□□□□ -0.9
NIPBL-205ENST00000505998 GLB1P16278 677 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 LMNB1P20700 586 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 GATA4P43694 442 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 LIG3P49916 1009 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 FDX2Q6P4F2 183 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 GRIN3AQ8TCU5 1115 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms