RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 UQCRFS1P1P0C7P4 283 aa19.03■□□□□ 0.64
PCDH1-205ENST00000505937 TNFAIP1Q13829 316 aa19.03■□□□□ 0.64
PCDH1-205ENST00000505937 RASGRF1Q13972 1273 aa19.03■□□□□ 0.64
PCDH1-205ENST00000505937 MRIQ9BWK5 157 aa19.03■□□□□ 0.64
PCDH1-205ENST00000505937 SALL1Q9NSC2 1324 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 CLRN2A0PK11 232 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 GRIK5Q16478 980 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 TTC39AQ5SRH9 613 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 SPTY2D1Q68D10 685 aaPredicted RBP19.02■□□□□ 0.64
PCDH1-205ENST00000505937 DLK2Q6UY11 383 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 SAPCD2Q86UD0 394 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 JMYQ8N9B5 988 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 PPP2R3BQ9Y5P8 575 aa19.02■□□□□ 0.64
PCDH1-205ENST00000505937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.02■□□□□ 0.64
PCDH1-205ENST00000505937 TRPM7Q96QT4 1865 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 HUNKP57058 714 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 FKBP1BP68106 108 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 HHIPL2Q6UWX4 724 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 HHIPL1Q96JK4 782 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 ZDHHC15Q96MV8 337 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 DEFB129Q9H1M3 183 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 TMOD2Q9NZR1 351 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
PCDH1-205ENST00000505937 PCDHAC2Q9Y5I4 1007 aa19.01■□□□□ 0.63
PCDH1-205ENST00000505937 COL1A1P02452 1464 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-205ENST00000505937 RAB11FIP3O75154 756 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 ARID4AP29374 1257 aaPredicted RBP19■□□□□ 0.63
PCDH1-205ENST00000505937 VEGFBP49765 207 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 SPDYE2Q495Y8 402 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 DZIP1Q86YF9 867 aaKnown RBP19■□□□□ 0.63
PCDH1-205ENST00000505937 SLF2Q8IX21 1173 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 SPATA5Q8NB90 893 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 KIF1BPQ96EK5 621 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 DBNDD2Q9BQY9 259 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 ZNF70Q9UC06 446 aaPredicted RBP19■□□□□ 0.63
PCDH1-205ENST00000505937 ABCF2Q9UG63 623 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 ARAP2Q8WZ64 1704 aa19■□□□□ 0.63
PCDH1-205ENST00000505937 PRDX5P30044 214 aa18.99■□□□□ 0.63
PCDH1-205ENST00000505937 TNNI2P48788 182 aa18.99■□□□□ 0.63
PCDH1-205ENST00000505937 GRM1Q13255 1194 aa18.99■□□□□ 0.63
PCDH1-205ENST00000505937 TTLL12Q14166 644 aaPredicted RBP18.99■□□□□ 0.63
PCDH1-205ENST00000505937 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
PCDH1-205ENST00000505937 CAPNS2Q96L46 248 aa18.99■□□□□ 0.63
PCDH1-205ENST00000505937 TDRD3Q9H7E2 651 aaKnown RBP18.99■□□□□ 0.63
PCDH1-205ENST00000505937 POLR2AP24928 1970 aaKnown RBP18.99■□□□□ 0.63
PCDH1-205ENST00000505937 SUPT20HL1Q3ZLR7 823 aa18.98■□□□□ 0.63
PCDH1-205ENST00000505937 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
PCDH1-205ENST00000505937 ERICH6Q7L0X2 663 aa18.98■□□□□ 0.63
PCDH1-205ENST00000505937 AACSQ86V21 672 aa18.98■□□□□ 0.63
PCDH1-205ENST00000505937 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
PCDH1-205ENST00000505937 RHPN1Q8TCX5 695 aa18.98■□□□□ 0.63
PCDH1-205ENST00000505937 HMG20BQ9P0W2 317 aa18.98■□□□□ 0.63
PCDH1-205ENST00000505937 WDR33Q9C0J8 1336 aaKnown RBP18.98■□□□□ 0.63
PCDH1-205ENST00000505937 APBB1O00213 710 aa18.97■□□□□ 0.63
PCDH1-205ENST00000505937 EAF2Q96CJ1 260 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-205ENST00000505937 CCDC8Q9H0W5 538 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-205ENST00000505937 DBNLQ9UJU6 430 aaKnown RBP18.97■□□□□ 0.63
PCDH1-205ENST00000505937 MYH13Q9UKX3 1938 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 MCAMP43121 646 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 RASA3Q14644 834 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 DIXDC1Q155Q3 683 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 CYP4F22Q6NT55 531 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 APOBEC3HQ6NTF7 200 aaKnown RBP18.96■□□□□ 0.63
PCDH1-205ENST00000505937 ARMC9Q7Z3E5 817 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 ZNF512BQ96KM6 892 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-205ENST00000505937 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
PCDH1-205ENST00000505937 TCP10L2B9ZVM9 353 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 PPP1R12BO60237 982 aaPredicted RBP18.95■□□□□ 0.62
PCDH1-205ENST00000505937 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
PCDH1-205ENST00000505937 GSTO1P78417 241 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 RGMBQ6NW40 437 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 CCDC102AQ96A19 550 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 LRP2BPQ9P2M1 347 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 DAGLAQ9Y4D2 1042 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 AOX1Q06278 1338 aa18.95■□□□□ 0.62
PCDH1-205ENST00000505937 LDHCP07864 332 aa18.94■□□□□ 0.62
PCDH1-205ENST00000505937 ZNF157P51786 506 aaPredicted RBP18.94■□□□□ 0.62
PCDH1-205ENST00000505937 FKBP1CQ5VVH2 108 aa18.94■□□□□ 0.62
PCDH1-205ENST00000505937 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
PCDH1-205ENST00000505937 BCL11AQ9H165 835 aa18.94■□□□□ 0.62
PCDH1-205ENST00000505937 RAI14Q9P0K7 980 aa18.94■□□□□ 0.62
PCDH1-205ENST00000505937 MAP2K2P36507 400 aa18.93■□□□□ 0.62
PCDH1-205ENST00000505937 MAP2K1Q02750 393 aaPredicted RBP18.93■□□□□ 0.62
PCDH1-205ENST00000505937 NOGQ13253 232 aa18.93■□□□□ 0.62
PCDH1-205ENST00000505937 AIDAQ96BJ3 306 aa18.93■□□□□ 0.62
PCDH1-205ENST00000505937 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
PCDH1-205ENST00000505937 SNRKQ9NRH2 765 aa18.93■□□□□ 0.62
PCDH1-205ENST00000505937 TLR7Q9NYK1 1049 aaKnown RBP18.93■□□□□ 0.62
PCDH1-205ENST00000505937 PAPPA2Q9BXP8 1791 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 IGSF3O75054 1194 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 AAMPQ13685 434 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 PRKG1Q13976 671 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 TBC1D9Q6ZT07 1266 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 FAM83AQ86UY5 434 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 BEGAINQ9BUH8 593 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
PCDH1-205ENST00000505937 UBE2Q2LH0YL09 131 aa18.91■□□□□ 0.62
PCDH1-205ENST00000505937 CACNB3P54284 484 aa18.91■□□□□ 0.62
PCDH1-205ENST00000505937 MECOMQ03112 1051 aa18.91■□□□□ 0.62
PCDH1-205ENST00000505937 HOOK2Q96ED9 719 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms