RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 IMMTQ16891 758 aaKnown RBP9.57□□□□□ -0.88
COL4A5-208ENST00000505728 DHX32Q7L7V1 743 aaKnown RBP9.57□□□□□ -0.88
COL4A5-208ENST00000505728 ZGPATQ8N5A5 531 aaKnown RBP9.57□□□□□ -0.88
COL4A5-208ENST00000505728 GBP4Q96PP9 640 aa9.57□□□□□ -0.88
COL4A5-208ENST00000505728 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
COL4A5-208ENST00000505728 BCS1LQ9Y276 419 aa9.57□□□□□ -0.88
COL4A5-208ENST00000505728 COL4A1P02462 1669 aa9.57□□□□□ -0.88
COL4A5-208ENST00000505728 PCNTO95613 3336 aa9.57□□□□□ -0.88
COL4A5-208ENST00000505728 PATL2C9JE40 543 aaKnown RBP9.56□□□□□ -0.88
COL4A5-208ENST00000505728 FGAP02671 866 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 PDIA4P13667 645 aaKnown RBP9.56□□□□□ -0.88
COL4A5-208ENST00000505728 CPA1P15085 419 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 HSPA6P17066 643 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 GNAT2P19087 354 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 EXOSC10Q01780 885 aaKnown RBP9.56□□□□□ -0.88
COL4A5-208ENST00000505728 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
COL4A5-208ENST00000505728 MAGEB6Q8N7X4 407 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 TNPO1Q92973 898 aaKnown RBP9.56□□□□□ -0.88
COL4A5-208ENST00000505728 AIDAQ96BJ3 306 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 CHMP4CQ96CF2 233 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 STRBPQ96SI9 672 aaKnown RBP9.56□□□□□ -0.88
COL4A5-208ENST00000505728 BRIP1Q9BX63 1249 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 ZMYM6O95789 1325 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 XDHP47989 1333 aa9.56□□□□□ -0.88
COL4A5-208ENST00000505728 TNRC6CQ9HCJ0 1690 aaKnown RBP9.55□□□□□ -0.88
COL4A5-208ENST00000505728 E7EWF7 191 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 ZNF213O14771 459 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-208ENST00000505728 ARHGAP27Q6ZUM4 889 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 FBXL16Q8N461 479 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 ANKIB1Q9P2G1 1089 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 TAF6LQ9Y6J9 622 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 ANKRD31Q8N7Z5 1873 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 IRS2Q9Y4H2 1338 aa9.55□□□□□ -0.88
COL4A5-208ENST00000505728 WDR90Q96KV7 1748 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 DDX11L8A8MPP1 907 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 FOXP2O15409 715 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 CYP7A1P22680 504 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 PDE6BP35913 854 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 TOB2Q14106 344 aaPredicted RBP9.54□□□□□ -0.88
COL4A5-208ENST00000505728 ME3Q16798 604 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 SPTY2D1Q68D10 685 aaPredicted RBP9.54□□□□□ -0.88
COL4A5-208ENST00000505728 Q6ZUG5 572 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 STOX1Q6ZVD7 989 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 SP8Q8IXZ3 490 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 TDRD7Q8NHU6 1098 aaKnown RBP9.54□□□□□ -0.88
COL4A5-208ENST00000505728 PODXL2Q9NZ53 605 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 RAI14Q9P0K7 980 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 TPCN1Q9ULQ1 816 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 WDR19Q8NEZ3 1342 aa9.54□□□□□ -0.88
COL4A5-208ENST00000505728 MYH13Q9UKX3 1938 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 WTIPA6NIX2 430 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-208ENST00000505728 GOLGA6L22H0YM25 854 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 BRD1O95696 1058 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 APPP05067 770 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 NPR1P16066 1061 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 CHRNA5P30532 468 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 ALDH1B1P30837 517 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 GPSM2P81274 684 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 TTLL5Q6EMB2 1281 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 WDR66Q8TBY9 1149 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 CNKSR2Q8WXI2 1034 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 AGXT2Q9BYV1 514 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 NACAP1Q9BZK3 213 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 ABCF2Q9UG63 623 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-208ENST00000505728 CACNA1SQ13698 1873 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 SALL1Q9NSC2 1324 aa9.53□□□□□ -0.88
COL4A5-208ENST00000505728 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 GSG1L2A8MUP6 293 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 MBD4O95243 580 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 BAG4O95429 457 aaKnown RBP9.52□□□□□ -0.89
COL4A5-208ENST00000505728 LARGE1O95461 756 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 SRGNP10124 158 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 COL11A2P13942 1736 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-208ENST00000505728 FGD1P98174 961 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 TRDNQ13061 729 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 NAA16Q6N069 864 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-208ENST00000505728 TIAM2Q8IVF5 1701 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 IFNL3Q8IZI9 196 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 TCEANC2Q96MN5 208 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 LARP6Q9BRS8 491 aaKnown RBP9.52□□□□□ -0.89
COL4A5-208ENST00000505728 PIM2Q9P1W9 311 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 ZDHHC9Q9Y397 364 aa9.52□□□□□ -0.89
COL4A5-208ENST00000505728 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
COL4A5-208ENST00000505728 DICER1Q9UPY3 1922 aaKnown RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 PFKFB2O60825 505 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 KLRK1P26718 216 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 MCM5P33992 734 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 EVCP57679 992 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 SKOR2Q2VWA4 1001 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms