RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 ZNF70Q9UC06 446 aaPredicted RBP22.56■■□□□ 1.2
CCND3-208ENST00000505672 LAMB1P07942 1786 aa22.55■■□□□ 1.2
CCND3-208ENST00000505672 SPDYE2Q495Y8 402 aa22.55■■□□□ 1.2
CCND3-208ENST00000505672 TEPSINQ96N21 525 aa22.55■■□□□ 1.2
CCND3-208ENST00000505672 TDRD3Q9H7E2 651 aaKnown RBP22.55■■□□□ 1.2
CCND3-208ENST00000505672 SERPINA10Q9UK55 444 aa22.55■■□□□ 1.2
CCND3-208ENST00000505672 TTF2Q9UNY4 1162 aaKnown RBP22.55■■□□□ 1.2
CCND3-208ENST00000505672 ARAP2Q8WZ64 1704 aa22.54■■□□□ 1.2
CCND3-208ENST00000505672 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
CCND3-208ENST00000505672 FBXO33Q7Z6M2 555 aa22.54■■□□□ 1.2
CCND3-208ENST00000505672 PTPN18Q99952 460 aa22.54■■□□□ 1.2
CCND3-208ENST00000505672 MYH13Q9UKX3 1938 aa22.54■■□□□ 1.2
CCND3-208ENST00000505672 MROH5Q6ZUA9 1318 aa22.54■■□□□ 1.2
CCND3-208ENST00000505672 MKI67P46013 3256 aaKnown RBP22.53■■□□□ 1.2
CCND3-208ENST00000505672 IREB2P48200 963 aaKnown RBP22.53■■□□□ 1.2
CCND3-208ENST00000505672 LRRC24Q50LG9 513 aa22.53■■□□□ 1.2
CCND3-208ENST00000505672 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
CCND3-208ENST00000505672 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
CCND3-208ENST00000505672 TESPA1A2RU30 521 aaPredicted RBP22.52■■□□□ 1.2
CCND3-208ENST00000505672 ANKRD13AQ8IZ07 590 aa22.52■■□□□ 1.2
CCND3-208ENST00000505672 KLHDC4Q8TBB5 520 aa22.52■■□□□ 1.2
CCND3-208ENST00000505672 CRKP46108 304 aa22.51■■□□□ 1.19
CCND3-208ENST00000505672 METTL24Q5JXM2 366 aa22.51■■□□□ 1.19
CCND3-208ENST00000505672 IQSEC3Q9UPP2 1182 aaPredicted RBP22.51■■□□□ 1.19
CCND3-208ENST00000505672 KIF16BQ96L93 1317 aa22.51■■□□□ 1.19
CCND3-208ENST00000505672 CAP1Q01518 475 aa22.5■■□□□ 1.19
CCND3-208ENST00000505672 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.5■■□□□ 1.19
CCND3-208ENST00000505672 OTOP1Q7RTM1 612 aa22.5■■□□□ 1.19
CCND3-208ENST00000505672 VGLL2Q8N8G2 317 aa22.5■■□□□ 1.19
CCND3-208ENST00000505672 TMEM39BQ9GZU3 492 aa22.5■■□□□ 1.19
CCND3-208ENST00000505672 ELP3Q9H9T3 547 aa22.5■■□□□ 1.19
CCND3-208ENST00000505672 BRCA2P51587 3418 aa22.5■■□□□ 1.19
CCND3-208ENST00000505672 OTOFQ9HC10 1997 aa22.49■■□□□ 1.19
CCND3-208ENST00000505672 TCP10L2B9ZVM9 353 aa22.49■■□□□ 1.19
CCND3-208ENST00000505672 UBTFL1P0CB47 393 aaPredicted RBP22.49■■□□□ 1.19
CCND3-208ENST00000505672 HNRNPUQ00839 825 aaKnown RBP eCLIP22.49■■□□□ 1.19
CCND3-208ENST00000505672 CRHR2Q13324 411 aa22.49■■□□□ 1.19
CCND3-208ENST00000505672 CNKSR2Q8WXI2 1034 aa22.49■■□□□ 1.19
CCND3-208ENST00000505672 MS4A4AQ96JQ5 239 aa22.49■■□□□ 1.19
CCND3-208ENST00000505672 TRIM17Q9Y577 477 aa22.49■■□□□ 1.19
CCND3-208ENST00000505672 TNFAIP1Q13829 316 aa22.48■■□□□ 1.19
CCND3-208ENST00000505672 OPTNQ96CV9 577 aa22.48■■□□□ 1.19
CCND3-208ENST00000505672 PDE8BO95263 885 aa22.47■■□□□ 1.19
CCND3-208ENST00000505672 RFX5P48382 616 aaPredicted RBP22.46■■□□□ 1.19
CCND3-208ENST00000505672 BCAMP50895 628 aa22.46■■□□□ 1.19
CCND3-208ENST00000505672 CHAF1AQ13111 956 aaPredicted RBP22.46■■□□□ 1.19
CCND3-208ENST00000505672 PRPF38BQ5VTL8 546 aaKnown RBP22.46■■□□□ 1.19
CCND3-208ENST00000505672 CD99L2Q8TCZ2 262 aa22.46■■□□□ 1.19
CCND3-208ENST00000505672 ARHGAP45Q92619 1136 aa22.46■■□□□ 1.19
CCND3-208ENST00000505672 CACNB3P54284 484 aa22.45■■□□□ 1.18
CCND3-208ENST00000505672 HDLBPQ00341 1268 aaKnown RBP22.45■■□□□ 1.18
CCND3-208ENST00000505672 VPS37DQ86XT2 251 aa22.45■■□□□ 1.18
CCND3-208ENST00000505672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.45■■□□□ 1.18
CCND3-208ENST00000505672 PTPN22Q9Y2R2 807 aa22.45■■□□□ 1.18
CCND3-208ENST00000505672 EYA2O00167 538 aa22.44■■□□□ 1.18
CCND3-208ENST00000505672 MAP3K9P80192 1104 aa22.44■■□□□ 1.18
CCND3-208ENST00000505672 VGLL4Q14135 290 aa22.44■■□□□ 1.18
CCND3-208ENST00000505672 OTUD7BQ6GQQ9 843 aa22.44■■□□□ 1.18
CCND3-208ENST00000505672 BRI3BPQ8WY22 251 aa22.44■■□□□ 1.18
CCND3-208ENST00000505672 MEIS3Q99687 375 aa22.44■■□□□ 1.18
CCND3-208ENST00000505672 LRRFIP2Q9Y608 721 aaKnown RBP22.44■■□□□ 1.18
CCND3-208ENST00000505672 BCAR3O75815 825 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 FGFR2P21802 821 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 CAVIN4Q5BKX8 364 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 INTS3Q68E01 1043 aaKnown RBP22.43■■□□□ 1.18
CCND3-208ENST00000505672 TBC1D22AQ8WUA7 517 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 ERO1AQ96HE7 468 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 MRIQ9BWK5 157 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 HDAC5Q9UQL6 1122 aa22.43■■□□□ 1.18
CCND3-208ENST00000505672 POTEFA5A3E0 1075 aa22.42■■□□□ 1.18
CCND3-208ENST00000505672 TNNI2P48788 182 aa22.42■■□□□ 1.18
CCND3-208ENST00000505672 SP3Q02447 781 aa22.42■■□□□ 1.18
CCND3-208ENST00000505672 PUM3Q15397 648 aaKnown RBP22.42■■□□□ 1.18
CCND3-208ENST00000505672 APOBEC3HQ6NTF7 200 aaKnown RBP22.42■■□□□ 1.18
CCND3-208ENST00000505672 FRAT1Q92837 279 aaPredicted RBP22.42■■□□□ 1.18
CCND3-208ENST00000505672 IPO8O15397 1037 aaKnown RBP22.41■■□□□ 1.18
CCND3-208ENST00000505672 TEKT1Q969V4 418 aa22.41■■□□□ 1.18
CCND3-208ENST00000505672 ZDHHC15Q96MV8 337 aa22.41■■□□□ 1.18
CCND3-208ENST00000505672 SIL1Q9H173 461 aa22.41■■□□□ 1.18
CCND3-208ENST00000505672 FRAT2O75474 233 aaPredicted RBP22.4■■□□□ 1.18
CCND3-208ENST00000505672 IFIT1P09914 478 aaKnown RBP22.4■■□□□ 1.18
CCND3-208ENST00000505672 TRIM27P14373 513 aa22.4■■□□□ 1.18
CCND3-208ENST00000505672 ATF7IPQ6VMQ6 1270 aa22.4■■□□□ 1.18
CCND3-208ENST00000505672 ATG9AQ7Z3C6 839 aa22.4■■□□□ 1.18
CCND3-208ENST00000505672 FAM43AQ8N2R8 423 aa22.4■■□□□ 1.18
CCND3-208ENST00000505672 EFCC1Q9HA90 598 aa22.4■■□□□ 1.18
CCND3-208ENST00000505672 TNNQ9UQP3 1299 aa22.4■■□□□ 1.18
CCND3-208ENST00000505672 CCL15-CCL14A0A0B4J2E2 113 aa22.39■■□□□ 1.17
CCND3-208ENST00000505672 CCL15Q16663 113 aa22.39■■□□□ 1.17
CCND3-208ENST00000505672 SNCAIPQ9Y6H5 919 aa22.39■■□□□ 1.17
CCND3-208ENST00000505672 GNAI3P08754 354 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 SLC5A1P13866 664 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 GTF2A2P52657 109 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 FAM83AQ86UY5 434 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 ZKSCAN4Q969J2 545 aaPredicted RBP22.38■■□□□ 1.17
CCND3-208ENST00000505672 ARMC5Q96C12 935 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 OTUD5Q96G74 571 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 FBXO3Q9UK99 471 aa22.38■■□□□ 1.17
CCND3-208ENST00000505672 SPDYE5A6NIY4 337 aa22.37■■□□□ 1.17
CCND3-208ENST00000505672 CIAO1O76071 339 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms