RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ANKRD13DQ6ZTN6 518 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 THNSL2Q86YJ6 484 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 LEO1Q8WVC0 666 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 PPM1EQ8WY54 764 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZNF516Q92618 1163 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 SCYL1Q96KG9 808 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 SLC26A8Q96RN1 970 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 CHRDQ9H2X0 955 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 PPCSQ9HAB8 311 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 BRMS1Q9HCU9 246 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 KCNQ5Q9NR82 932 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GOLGA6AQ9NYA3 693 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GPN3Q9UHW5 284 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 INTUQ9ULD6 942 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GJA3Q9Y6H8 435 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 POTECB2RU33 542 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 PPEF1O14829 653 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 KCNQ2O43526 872 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 CT47B1P0C2W7 299 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 NBPF7P0C2Y1 421 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 CDC27P30260 824 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 INPP5BP32019 993 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 PHKA2P46019 1235 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 EMP3P54852 163 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 SKOR1P84550 965 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 RELBQ01201 579 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 NR5A1Q13285 461 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 PABPC4Q13310 644 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 HLTFQ14527 1009 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 MLC1Q15049 377 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 LRRC69Q6ZNQ3 347 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 DDX46Q7L014 1031 aaKnown RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 EEPD1Q7L9B9 569 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 BTLAQ7Z6A9 289 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZBTB46Q86UZ6 589 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 NLRP13Q86W25 1043 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 LSRQ86X29 649 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF687Q8N1G0 1237 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 GLIS3Q8NEA6 775 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 ST13P5Q8NFI4 369 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 PLD4Q96BZ4 506 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 AGBL1Q96MI9 1066 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 CEP63Q96MT8 703 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 CDK15Q96Q40 435 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 CDC6Q99741 560 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 SPATA9Q9BWV2 254 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 FHDC1Q9C0D6 1143 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF395Q9H8N7 513 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 IL21Q9HBE4 155 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZFYVE1Q9HBF4 777 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 PRDM10Q9NQV6 1147 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 KCNMB2Q9Y691 235 aa4.65□□□□□ -1.67
HMGB1P22-201ENST00000505315 IFRD1O00458 451 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 AKAP10O43572 662 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 ADH1CP00326 375 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 L1CAMP32004 1257 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 NEK2P51955 445 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 CLCQ05315 142 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 MCL1Q07820 350 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 STRN3Q13033 797 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 VPS72Q15906 364 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 RC3H1Q5TC82 1133 aaKnown RBP4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 IER5Q5VY09 327 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 AGMOQ6ZNB7 445 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 RUFY4Q6ZNE9 571 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 KRT25Q7Z3Z0 450 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 NCAPG2Q86XI2 1143 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 PASD1Q8IV76 773 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 TMTC2Q8N394 836 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 NME8Q8N427 588 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 GPATCH11Q8N954 259 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 TTC8Q8TAM2 541 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 RIN3Q8TB24 985 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 ANKRD24Q8TF21 1146 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 CHST12Q9NRB3 414 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 SLC5A4Q9NY91 659 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 SAMM50Q9Y512 469 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 PCDHB5Q9Y5E4 795 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 PCDHB14Q9Y5E9 798 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 HRH3Q9Y5N1 445 aa4.64□□□□□ -1.67
HMGB1P22-201ENST00000505315 A0A087X0B3 334 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 IQCA1LA6NCM1 817 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 FAM205CA6NFA0 338 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 AGRPO00253 132 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 KHNYNO15037 678 aaKnown RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 RAPGEF3O95398 923 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 CYP2E1P05181 493 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 CD53P19397 219 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 POU3F3P20264 500 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 PTGIRP43119 386 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF157P51786 506 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 LSM11P83369 360 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 MPP2Q14168 576 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 GFOD2Q3B7J2 385 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 HGSNATQ68CP4 663 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 TRIM42Q8IWZ5 723 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 LRRC47Q8N1G4 583 aaKnown RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 WDR66Q8TBY9 1149 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 SP7Q8TDD2 431 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms