RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PUS7LQ9H0K6 701 aaKnown RBP13.79□□□□□ -0.2
UBE3D-206ENST00000505226 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 CCDC150Q8NCX0 1101 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 FHOD1Q9Y613 1164 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 CLCN6P51797 869 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 CMA1P23946 247 aa13.78□□□□□ -0.2
UBE3D-206ENST00000505226 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
UBE3D-206ENST00000505226 NBPF3Q9H094 633 aa13.78□□□□□ -0.2
UBE3D-206ENST00000505226 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
UBE3D-206ENST00000505226 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBE3D-206ENST00000505226 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
UBE3D-206ENST00000505226 DCAF5Q96JK2 942 aa13.78□□□□□ -0.2
UBE3D-206ENST00000505226 TJP1Q07157 1748 aa13.77□□□□□ -0.2
UBE3D-206ENST00000505226 TMEM232C9JQI7 657 aa13.77□□□□□ -0.2
UBE3D-206ENST00000505226 GORABQ5T7V8 394 aa13.77□□□□□ -0.2
UBE3D-206ENST00000505226 SHC4Q6S5L8 630 aa13.77□□□□□ -0.2
UBE3D-206ENST00000505226 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.2
UBE3D-206ENST00000505226 A1BGP04217 495 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
UBE3D-206ENST00000505226 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 FOXP4Q8IVH2 680 aaPredicted RBP13.77□□□□□ -0.21
UBE3D-206ENST00000505226 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
UBE3D-206ENST00000505226 DNAI1Q9UI46 699 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 UBE2Q2LH0YL09 131 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 RXRAP19793 462 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 KCNJ6P48051 423 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 PNOCQ13519 176 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 BRAPQ7Z569 592 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 ZBTB3Q9H5J0 574 aa13.77□□□□□ -0.21
UBE3D-206ENST00000505226 ETF1P62495 437 aaKnown RBP13.76□□□□□ -0.21
UBE3D-206ENST00000505226 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 CABP4P57796 275 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
UBE3D-206ENST00000505226 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 REXO1L1PQ8IX06 675 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
UBE3D-206ENST00000505226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE3D-206ENST00000505226 DDX60Q8IY21 1712 aaKnown RBP13.76□□□□□ -0.21
UBE3D-206ENST00000505226 IKBKBO14920 756 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 CDC27P30260 824 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 ZAP70P43403 619 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 PTPAQ15257 358 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 XAGE2Q96GT9 111 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 CCDC85AQ96PX6 553 aaPredicted RBP13.75□□□□□ -0.21
UBE3D-206ENST00000505226 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 C4AP0C0L4 1744 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 C4BP0C0L5 1744 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 BMP6P22004 513 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 KCNA4P22459 653 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 PLA2G4AP47712 749 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 CPLX1O14810 134 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 SYKP43405 635 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 UBASH3AP57075 661 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 TMEM139Q8IV31 216 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 MAP3K14Q99558 947 aa13.75□□□□□ -0.21
UBE3D-206ENST00000505226 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
UBE3D-206ENST00000505226 FOXN1O15353 648 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 PDE4BQ07343 736 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 CYB5R4Q7L1T6 521 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 METTL16Q86W50 562 aaKnown RBP13.74□□□□□ -0.21
UBE3D-206ENST00000505226 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 PHKBQ93100 1093 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 CIAO1O76071 339 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-206ENST00000505226 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 VPS37DQ86XT2 251 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 FANCLQ9NW38 375 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 ZBTB22O15209 634 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
UBE3D-206ENST00000505226 ZRANB2O95218 330 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBE3D-206ENST00000505226 NCOA7Q8NI08 942 aa13.74□□□□□ -0.21
UBE3D-206ENST00000505226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBE3D-206ENST00000505226 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 ERICH4A6NGS2 130 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 GPAA1O43292 621 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 CSB-PGBD3P0DP91 1061 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 TBC1D10CQ8IV04 446 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 CEP126Q9P2H0 1117 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 BMS1Q14692 1282 aaKnown RBP13.73□□□□□ -0.21
UBE3D-206ENST00000505226 TTC39AQ5SRH9 613 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 KRT40Q6A162 431 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 VSTM4Q8IW00 320 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
UBE3D-206ENST00000505226 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms