RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 GTF2IP78347 998 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 DACT2Q5SW24 774 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 GPC2Q8N158 579 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 AGBL3Q8NEM8 1001 aa12.44□□□□□ -0.42
RFC1-210ENST00000505077 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
RFC1-210ENST00000505077 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
RFC1-210ENST00000505077 HIP1O00291 1037 aa12.43□□□□□ -0.42
RFC1-210ENST00000505077 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
RFC1-210ENST00000505077 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
RFC1-210ENST00000505077 CHAF1AQ13111 956 aaPredicted RBP12.43□□□□□ -0.42
RFC1-210ENST00000505077 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
RFC1-210ENST00000505077 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
RFC1-210ENST00000505077 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
RFC1-210ENST00000505077 SNRKQ9NRH2 765 aa12.43□□□□□ -0.42
RFC1-210ENST00000505077 LRP2BPQ9P2M1 347 aa12.43□□□□□ -0.42
RFC1-210ENST00000505077 BAZ2AQ9UIF9 1905 aaKnown RBP12.43□□□□□ -0.42
RFC1-210ENST00000505077 PSMD14O00487 310 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 RAD17O75943 681 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 SDSP20132 328 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 GSTO1P78417 241 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 HDLBPQ00341 1268 aaKnown RBP12.42□□□□□ -0.42
RFC1-210ENST00000505077 CXCL9Q07325 125 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 CERS3Q8IU89 383 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 FSD1Q9BTV5 496 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
RFC1-210ENST00000505077 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
RFC1-210ENST00000505077 IDH1O75874 414 aaKnown RBP12.41□□□□□ -0.42
RFC1-210ENST00000505077 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
RFC1-210ENST00000505077 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
RFC1-210ENST00000505077 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
RFC1-210ENST00000505077 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
RFC1-210ENST00000505077 DPF2Q92785 391 aa12.41□□□□□ -0.42
RFC1-210ENST00000505077 MRIQ9BWK5 157 aa12.41□□□□□ -0.42
RFC1-210ENST00000505077 PIH1D3Q9NQM4 214 aaKnown RBP12.41□□□□□ -0.42
RFC1-210ENST00000505077 ZNF541Q9H0D2 1346 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 PRDX5P30044 214 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 UBE3CQ15386 1083 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 CASC1Q6TDU7 716 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 OGFOD1Q8N543 542 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 CERS5Q8N5B7 392 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 GMLQ99445 158 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 ANTXR1Q9H6X2 564 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 RAI14Q9P0K7 980 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 NDUFB9Q9Y6M9 179 aa12.4□□□□□ -0.42
RFC1-210ENST00000505077 RNF113AO15541 343 aaKnown RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 MAP4K4O95819 1239 aaPredicted RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 LDHCP07864 332 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 PDE6AP16499 860 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 ADD2P35612 726 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 MECOMQ03112 1051 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 NAA16Q6N069 864 aaPredicted RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 TTF2Q9UNY4 1162 aaKnown RBP12.39□□□□□ -0.43
RFC1-210ENST00000505077 JAG2Q9Y219 1238 aa12.39□□□□□ -0.43
RFC1-210ENST00000505077 MROH7-TTC4A0A0A0MT08 1334 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 GAKO14976 1311 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 RAD50Q92878 1312 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 CDC45O75419 566 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 KIAA0825Q8IV33 1275 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 MAGEB6Q8N7X4 407 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 TEKT1Q969V4 418 aa12.38□□□□□ -0.43
RFC1-210ENST00000505077 FAM163AQ96GL9 167 aaPredicted RBP12.38□□□□□ -0.43
RFC1-210ENST00000505077 GLTPD2A6NH11 291 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 PLCG2P16885 1265 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
RFC1-210ENST00000505077 GMPSP49915 693 aaPredicted RBP12.37□□□□□ -0.43
RFC1-210ENST00000505077 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
RFC1-210ENST00000505077 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 RUFY2Q8WXA3 655 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 APPBP2Q92624 585 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 ZDHHC15Q96MV8 337 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 NOL10Q9BSC4 688 aaKnown RBP12.37□□□□□ -0.43
RFC1-210ENST00000505077 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 GPRC5DQ9NZD1 345 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
RFC1-210ENST00000505077 TCRBV5S4A2TA0A5A2 114 aa12.36□□□□□ -0.43
RFC1-210ENST00000505077 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
RFC1-210ENST00000505077 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
RFC1-210ENST00000505077 BAG3O95817 575 aa12.36□□□□□ -0.43
RFC1-210ENST00000505077 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
RFC1-210ENST00000505077 ZMYM1Q5SVZ6 1142 aa12.36□□□□□ -0.43
RFC1-210ENST00000505077 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms