RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 AGBL1Q96MI9 1066 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 SBF1O95248 1867 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 A0A0G2JLW4 131 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 TTLL8A6PVC2 850 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 POLRMTO00411 1230 aaKnown RBP6.48□□□□□ -1.37
CDH9-203ENST00000505045 GIGYF1O75420 1035 aaPredicted RBP6.48□□□□□ -1.37
CDH9-203ENST00000505045 TEFQ10587 303 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 THUMPD2Q9BTF0 503 aaKnown RBP6.48□□□□□ -1.37
CDH9-203ENST00000505045 NDUFB9Q9Y6M9 179 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 ATP10DQ9P241 1426 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 PPFIA3O75145 1194 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 ADH1AP07327 375 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 DPEP1P16444 411 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 KCNA3P22001 575 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
CDH9-203ENST00000505045 NLGN1Q8N2Q7 840 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 PLEKHF1Q96S99 279 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 TNRC6CQ9HCJ0 1690 aaKnown RBP6.47□□□□□ -1.37
CDH9-203ENST00000505045 TIAM2Q8IVF5 1701 aa6.47□□□□□ -1.37
CDH9-203ENST00000505045 PROCP04070 461 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 HMGB2P26583 209 aaKnown RBP6.46□□□□□ -1.37
CDH9-203ENST00000505045 CHRNA5P30532 468 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 EIF5P55010 431 aaKnown RBP6.46□□□□□ -1.37
CDH9-203ENST00000505045 MCCD1P59942 119 aaPredicted RBP6.46□□□□□ -1.37
CDH9-203ENST00000505045 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.37
CDH9-203ENST00000505045 NFIXQ14938 502 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 ZNF385CQ66K41 422 aaPredicted RBP6.46□□□□□ -1.37
CDH9-203ENST00000505045 TTC5Q8N0Z6 440 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 SVOPQ8N4V2 548 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 NARFQ9UHQ1 456 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 PCDHB9Q9Y5E1 797 aa6.46□□□□□ -1.37
CDH9-203ENST00000505045 CCDC88AQ3V6T2 1871 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 A1BGP04217 495 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 TM4SF1P30408 202 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 PTGIRP43119 386 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 CTSOP43234 321 aaPredicted RBP6.46□□□□□ -1.38
CDH9-203ENST00000505045 MARSP56192 900 aaKnown RBP6.46□□□□□ -1.38
CDH9-203ENST00000505045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.46□□□□□ -1.38
CDH9-203ENST00000505045 MIS18AQ9NYP9 233 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 NUDCQ9Y266 331 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.38
CDH9-203ENST00000505045 PARP3Q9Y6F1 533 aa6.46□□□□□ -1.38
CDH9-203ENST00000505045 ARFGEF2Q9Y6D5 1785 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 NUP98P52948 1817 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 GRIN3BO60391 1043 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 RAB15P59190 212 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 RELBQ01201 579 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
CDH9-203ENST00000505045 SCARF2Q96GP6 870 aaPredicted RBP6.45□□□□□ -1.38
CDH9-203ENST00000505045 FMNL2Q96PY5 1086 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 BCS1LQ9Y276 419 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 USP16Q9Y5T5 823 aa6.45□□□□□ -1.38
CDH9-203ENST00000505045 FIGNL2A6NMB9 653 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 ITGB2P05107 769 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 KRT76Q01546 638 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 FOXD4L5Q5VV16 416 aaPredicted RBP6.44□□□□□ -1.38
CDH9-203ENST00000505045 TBC1D9BQ66K14 1250 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 NBPF10Q6P3W6 841 aaKnown RBP6.44□□□□□ -1.38
CDH9-203ENST00000505045 BICDL1Q6ZP65 573 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 NBPF15Q8N660 670 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 INSM2Q96T92 566 aaPredicted RBP6.44□□□□□ -1.38
CDH9-203ENST00000505045 TBC1D2BQ9UPU7 963 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 SLX4Q8IY92 1834 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 FER1L6Q2WGJ9 1857 aa6.44□□□□□ -1.38
CDH9-203ENST00000505045 SLC35F4A4IF30 521 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 APBB1O00213 710 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 CAMTA2O94983 1202 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 STARD3NLO95772 234 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 TGFB2P61812 414 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 PTSQ03393 145 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 IRF5Q13568 498 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 RNF217Q8TC41 542 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 ZNF395Q9H8N7 513 aaPredicted RBP6.43□□□□□ -1.38
CDH9-203ENST00000505045 IL6STP40189 918 aaPredicted RBP6.43□□□□□ -1.38
CDH9-203ENST00000505045 ERVK-9P63128 1117 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 NFE2L2Q16236 605 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 CCDC146Q8IYE0 955 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 RTF1Q92541 710 aaKnown RBP6.43□□□□□ -1.38
CDH9-203ENST00000505045 CNTNAP3BQ96NU0 1288 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 CNTNAP3Q9BZ76 1288 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 CYLDQ9NQC7 956 aa6.43□□□□□ -1.38
CDH9-203ENST00000505045 MYBBP1AQ9BQG0 1328 aaKnown RBP6.43□□□□□ -1.38
CDH9-203ENST00000505045 ANKRD36CQ5JPF3 1778 aa6.42□□□□□ -1.38
CDH9-203ENST00000505045 SERPINB2P05120 415 aa6.42□□□□□ -1.38
CDH9-203ENST00000505045 PRELPP51888 382 aa6.42□□□□□ -1.38
CDH9-203ENST00000505045 PRR5LQ6MZQ0 368 aa6.42□□□□□ -1.38
CDH9-203ENST00000505045 RRP7AQ9Y3A4 280 aaKnown RBP6.42□□□□□ -1.38
CDH9-203ENST00000505045 DICER1Q9UPY3 1922 aaKnown RBP6.42□□□□□ -1.38
CDH9-203ENST00000505045 SNRPA1P09661 255 aaKnown RBP6.41□□□□□ -1.38
CDH9-203ENST00000505045 LAMB2P55268 1798 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 C1QTNF8P60827 252 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 RALBP1Q15311 655 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 RNF20Q5VTR2 975 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 NANOS1Q8WY41 292 aaKnown RBP6.41□□□□□ -1.38
CDH9-203ENST00000505045 GOLGA2P5Q9HBQ8 144 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 MAPK8IP3Q9UPT6 1336 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 ABCC12Q96J65 1359 aa6.41□□□□□ -1.38
CDH9-203ENST00000505045 HTATSF1O43719 755 aaKnown RBP6.41□□□□□ -1.38
CDH9-203ENST00000505045 TRAK2O60296 914 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms