RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 NBPF3Q9H094 633 aa18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 LRP2BPQ9P2M1 347 aa18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 ZNF804BA4D1E1 1349 aa18.13■□□□□ 0.49
SNCAIP-207ENST00000504884 BTAF1O14981 1849 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 MBD4O95243 580 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 CAVIN4Q5BKX8 364 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 SMIM5Q71RC9 77 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 GPHNQ9NQX3 736 aaPredicted RBP18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 TFIP11Q9UBB9 837 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 ONECUT3O60422 494 aaPredicted RBP18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 RPS8P62241 208 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 ARHGEF1Q92888 912 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 NACAP1Q9BZK3 213 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 NAPBQ9H115 298 aa18.12■□□□□ 0.49
SNCAIP-207ENST00000504884 PNPLA7Q6ZV29 1317 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 NHSQ6T4R5 1651 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 DOCK2Q92608 1830 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 GOLGA6L4A6NEF3 574 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 TPRNQ4KMQ1 711 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 TBC1D10CQ8IV04 446 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 LEO1Q8WVC0 666 aaPredicted RBP18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
SNCAIP-207ENST00000504884 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
SNCAIP-207ENST00000504884 CELF1Q92879 486 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-207ENST00000504884 TMEM87BQ96K49 555 aa18.1■□□□□ 0.49
SNCAIP-207ENST00000504884 ARMT1Q9H993 441 aa18.1■□□□□ 0.49
SNCAIP-207ENST00000504884 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-207ENST00000504884 GOLGA8BA8MQT2 603 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 GSG1L2A8MUP6 293 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 GYG1P46976 350 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 DENND2AQ9ULE3 1009 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 FDPSP14324 419 aaKnown RBP18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 VPS37DQ86XT2 251 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 ANKRD2Q9GZV1 360 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 CNNM2Q9H8M5 875 aa18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 EPB41L4AQ9HCS5 686 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-207ENST00000504884 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.49
SNCAIP-207ENST00000504884 CPLX1O14810 134 aa18.08■□□□□ 0.49
SNCAIP-207ENST00000504884 RFC4P35249 363 aa18.08■□□□□ 0.49
SNCAIP-207ENST00000504884 CYB5R4Q7L1T6 521 aa18.08■□□□□ 0.49
SNCAIP-207ENST00000504884 RGS22Q8NE09 1264 aa18.08■□□□□ 0.49
SNCAIP-207ENST00000504884 SLC4A4Q9Y6R1 1079 aa18.08■□□□□ 0.49
SNCAIP-207ENST00000504884 B4E1Z4 1266 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 SH2B2O14492 632 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 SEMA3EO15041 775 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 CYP7A1P22680 504 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 FAM84BQ96KN1 310 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 UVSSAQ2YD98 709 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 AKNAD1Q5T1N1 836 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 FBXO33Q7Z6M2 555 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 LCORLQ8N3X6 602 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 RNF214Q8ND24 703 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 ZNF396Q96N95 335 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 KRT23Q9C075 422 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 RAI14Q9P0K7 980 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 IQSEC3Q9UPP2 1182 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 AFF2P51816 1311 aa18.07■□□□□ 0.48
SNCAIP-207ENST00000504884 COL4A1P02462 1669 aa18.06■□□□□ 0.48
SNCAIP-207ENST00000504884 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
SNCAIP-207ENST00000504884 TDO2P48775 406 aa18.06■□□□□ 0.48
SNCAIP-207ENST00000504884 IGDCC4Q8TDY8 1250 aa18.06■□□□□ 0.48
SNCAIP-207ENST00000504884 PDLIM2Q96JY6 352 aa18.06■□□□□ 0.48
SNCAIP-207ENST00000504884 ORC3Q9UBD5 711 aaPredicted RBP18.06■□□□□ 0.48
SNCAIP-207ENST00000504884 PRKAB2O43741 272 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 LIFRP42702 1097 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 MFSD6Q6ZSS7 791 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 SEPT12Q8IYM1 358 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 BCL11BQ9C0K0 894 aaPredicted RBP18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 RCOR1Q9UKL0 485 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 MAGEB6P1A0A0J9YX57 407 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 CDKL5O76039 1030 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 CTDSPL2Q05D32 466 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 CPLX2Q6PUV4 134 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 SGMS1Q86VZ5 419 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 STAG1Q8WVM7 1258 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 C8orf76Q96K31 380 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 ZSWIM5Q9P217 1185 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 NEDD4P46934 1319 aa18.05■□□□□ 0.48
SNCAIP-207ENST00000504884 COL24A1Q17RW2 1714 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 NPHP1O15259 732 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 LIG1P18858 919 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 TM4SF1P30408 202 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 FOSBP53539 338 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 TMEM67Q5HYA8 995 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 GIMAP6Q6P9H5 292 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 FAM196AQ6ZSG2 479 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 AMIGO3Q86WK7 504 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 MIGA1Q8NAN2 632 aa18.04■□□□□ 0.48
SNCAIP-207ENST00000504884 PGBD1Q96JS3 809 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms