RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 CTDSPL2Q05D32 466 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 SART3Q15020 963 aaKnown RBP11.33□□□□□ -0.6
CSF1R-203ENST00000504875 PGBD1Q96JS3 809 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 LOC102724428A0A0B4J2F2 783 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 SIK1P57059 783 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 AKAP17AQ02040 695 aaKnown RBP11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 PHKBQ93100 1093 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ZNF274Q96GC6 653 aaPredicted RBP11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ALG1Q9BT22 464 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ALDH8A1Q9H2A2 487 aaPredicted RBP11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ZNF652Q9Y2D9 606 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ADD1P35611 737 aaKnown RBP11.32□□□□□ -0.6
CSF1R-203ENST00000504875 BCAMP50895 628 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
CSF1R-203ENST00000504875 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 SLC26A6Q9BXS9 759 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 CBX8Q9HC52 389 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 INCENPQ9NQS7 918 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ELP1O95163 1332 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ZBTB43O43298 467 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 CSF1RP07333 972 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 ADD2P35612 726 aa11.32□□□□□ -0.6
CSF1R-203ENST00000504875 CDKL5O76039 1030 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 CYP7A1P22680 504 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 IARSP41252 1262 aaKnown RBP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 MFSD6Q6ZSS7 791 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSF1R-203ENST00000504875 UBAC1Q9BSL1 405 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
CSF1R-203ENST00000504875 MRPS27Q92552 414 aaKnown RBP11.3□□□□□ -0.6
CSF1R-203ENST00000504875 AIFM3Q96NN9 605 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
CSF1R-203ENST00000504875 JAG2Q9Y219 1238 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 MROH5Q6ZUA9 1318 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 TERF1P54274 439 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 CCDC186Q7Z3E2 898 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 ZNF592Q92610 1267 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 CDHR2Q9BYE9 1310 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 MRC1P22897 1456 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 PTGS1P23219 599 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 UTP14CQ5TAP6 766 aaKnown RBP11.3□□□□□ -0.6
CSF1R-203ENST00000504875 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 CEP57L1Q8IYX8 460 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
CSF1R-203ENST00000504875 PLA2G12BQ9BX93 195 aa11.3□□□□□ -0.6
CSF1R-203ENST00000504875 UBN2Q6ZU65 1347 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 SPTLC2O15270 562 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 NOLC1Q14978 699 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSF1R-203ENST00000504875 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 STRCP1A6NGW2 1772 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 ARFGEF2Q9Y6D5 1785 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 KCNQ2O43526 872 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 PRKAB2O43741 272 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
CSF1R-203ENST00000504875 SMC2O95347 1197 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 TPM4P67936 248 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 STX1AQ16623 288 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 CAVIN4Q5BKX8 364 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
CSF1R-203ENST00000504875 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
CSF1R-203ENST00000504875 ERVV-1B6SEH8 477 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 CTAGE5O15320 804 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 GYG1P46976 350 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 GTPBP4Q9BZE4 634 aaKnown RBP11.29□□□□□ -0.6
CSF1R-203ENST00000504875 ANO10Q9NW15 660 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 CLIC4Q9Y696 253 aa11.29□□□□□ -0.6
CSF1R-203ENST00000504875 SSRP1Q08945 709 aaKnown RBP11.28□□□□□ -0.6
CSF1R-203ENST00000504875 UBE3CQ15386 1083 aa11.28□□□□□ -0.6
CSF1R-203ENST00000504875 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
CSF1R-203ENST00000504875 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
CSF1R-203ENST00000504875 COL18A1P39060 1754 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms