RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 MYH16Q9H6N6 1097 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 ZFYVE28Q9HCC9 887 aa8.79□□□□□ -1
NPIPB3-203ENST00000504841 ZNF70Q9UC06 446 aaPredicted RBP8.79□□□□□ -1
NPIPB3-203ENST00000504841 ZSWIM8A7E2V4 1837 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
NPIPB3-203ENST00000504841 UNCXA6NJT0 531 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 H0YGN5 161 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 CSF1RP07333 972 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 IL1R1P14778 569 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 CASP7P55210 303 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 VGLL4Q14135 290 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 ARHGEF6Q15052 776 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 MFSD14BQ5SR56 506 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 NBPF11Q86T75 865 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 FAM43AQ8N2R8 423 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 ZNF594Q96JF6 807 aaPredicted RBP8.78□□□□□ -1
NPIPB3-203ENST00000504841 ARHGAP39Q9C0H5 1083 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 TMEM39BQ9GZU3 492 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 CNNM1Q9NRU3 951 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 TTF2Q9UNY4 1162 aaKnown RBP8.78□□□□□ -1
NPIPB3-203ENST00000504841 CSADQ9Y600 493 aa8.78□□□□□ -1
NPIPB3-203ENST00000504841 GYG1P46976 350 aa8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 GTF2A2P52657 109 aa8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 CACNB3P54284 484 aa8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 FKBP1AP62942 108 aaKnown RBP8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 MAP3K9P80192 1104 aa8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 C15orf52Q6ZUT6 534 aaKnown RBP8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 LINS1Q8NG48 757 aa8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
NPIPB3-203ENST00000504841 F6X3S4 739 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 WDHD1O75717 1129 aaPredicted RBP8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 CRKP46108 304 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 TNNI2P48788 182 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 FOXO4P98177 505 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 CHAF1AQ13111 956 aaPredicted RBP8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 KIF22Q14807 665 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 LMBR1LQ6UX01 489 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 LDHAL6AQ6ZMR3 332 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 TEPSINQ96N21 525 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 FAM205AQ6ZU69 1335 aa8.76□□□□□ -1.01
NPIPB3-203ENST00000504841 ARAP2Q8WZ64 1704 aa8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 SPDYE5A6NIY4 337 aa8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 EPHA10Q5JZY3 1008 aa8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 DPF3Q92784 378 aa8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 PRKRIP1Q9H875 184 aaPredicted RBP8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 SERPINA10Q9UK55 444 aa8.75□□□□□ -1.01
NPIPB3-203ENST00000504841 BTBD19C9JJ37 291 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 TLR2O60603 784 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 CETPP11597 493 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 HIBADHP31937 336 aaKnown RBP8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 LACTBP83111 547 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 MTFR1Q15390 333 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 GRIK5Q16478 980 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 VPS37DQ86XT2 251 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 TDRD7Q8NHU6 1098 aaKnown RBP8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 ZKSCAN4Q969J2 545 aaPredicted RBP8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 SHISA4Q96DD7 197 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 TMOD2Q9NZR1 351 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 CPA4Q9UI42 421 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 SNCAIPQ9Y6H5 919 aa8.74□□□□□ -1.01
NPIPB3-203ENST00000504841 GRM8O00222 908 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 IRF6O14896 467 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 SNAPC2Q13487 334 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 BEND3Q5T5X7 828 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 ERO1BQ86YB8 467 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 WWC1Q8IX03 1113 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 RAET1EQ8TD07 263 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 PUS3Q9BZE2 481 aaKnown RBP8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 FANCIQ9NVI1 1328 aa8.73□□□□□ -1.01
NPIPB3-203ENST00000504841 TRIOBPQ9H2D6 2365 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 PRR29P0C7W0 189 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 CTGFP29279 349 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 PSMC4P43686 418 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 UBE4AQ14139 1066 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 SLC4A10Q6U841 1118 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 TEKT1Q969V4 418 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 FAM84BQ96KN1 310 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 C9orf78Q9NZ63 289 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 BIN2Q9UBW5 565 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 MYPNQ86TC9 1320 aa8.72□□□□□ -1.01
NPIPB3-203ENST00000504841 PDHXO00330 501 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 OSBPP22059 807 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 INPP5BP32019 993 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 GRK4P32298 578 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 PRMT2P55345 433 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 PPIL2Q13356 520 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 DCAF15Q66K64 600 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms