RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 FRAT2O75474 233 aaPredicted RBP16■□□□□ 0.15
RNF4-206ENST00000504782 CACNB3P54284 484 aa16■□□□□ 0.15
RNF4-206ENST00000504782 PUM3Q15397 648 aaKnown RBP16■□□□□ 0.15
RNF4-206ENST00000504782 SPRYD7Q5W111 196 aa16■□□□□ 0.15
RNF4-206ENST00000504782 MIER1Q8N108 512 aa16■□□□□ 0.15
RNF4-206ENST00000504782 TEPSINQ96N21 525 aa16■□□□□ 0.15
RNF4-206ENST00000504782 API5Q9BZZ5 524 aaKnown RBP16■□□□□ 0.15
RNF4-206ENST00000504782 PPP2R3BQ9Y5P8 575 aa16■□□□□ 0.15
RNF4-206ENST00000504782 BCAR3O75815 825 aa15.99■□□□□ 0.15
RNF4-206ENST00000504782 GJA5P36382 358 aa15.99■□□□□ 0.15
RNF4-206ENST00000504782 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
RNF4-206ENST00000504782 SLC10A4Q96EP9 437 aa15.99■□□□□ 0.15
RNF4-206ENST00000504782 TMEM39BQ9GZU3 492 aa15.99■□□□□ 0.15
RNF4-206ENST00000504782 IFIT1P09914 478 aaKnown RBP15.98■□□□□ 0.15
RNF4-206ENST00000504782 SUPT20HL1Q3ZLR7 823 aa15.98■□□□□ 0.15
RNF4-206ENST00000504782 LPIN2Q92539 896 aa15.98■□□□□ 0.15
RNF4-206ENST00000504782 WNK4Q96J92 1243 aa15.98■□□□□ 0.15
RNF4-206ENST00000504782 PPP1R12BO60237 982 aaPredicted RBP15.97■□□□□ 0.15
RNF4-206ENST00000504782 SLC5A1P13866 664 aa15.97■□□□□ 0.15
RNF4-206ENST00000504782 INTS3Q68E01 1043 aaKnown RBP15.97■□□□□ 0.15
RNF4-206ENST00000504782 ZNF296Q8WUU4 475 aaPredicted RBP15.97■□□□□ 0.15
RNF4-206ENST00000504782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
RNF4-206ENST00000504782 KIF16BQ96L93 1317 aa15.96■□□□□ 0.15
RNF4-206ENST00000504782 CIAO1O76071 339 aa15.96■□□□□ 0.15
RNF4-206ENST00000504782 TRIM27P14373 513 aa15.96■□□□□ 0.15
RNF4-206ENST00000504782 ADORA1P30542 326 aa15.96■□□□□ 0.15
RNF4-206ENST00000504782 APOBEC3HQ6NTF7 200 aaKnown RBP15.96■□□□□ 0.15
RNF4-206ENST00000504782 TBC1D22AQ8WUA7 517 aa15.96■□□□□ 0.15
RNF4-206ENST00000504782 ARHGAP45Q92619 1136 aa15.96■□□□□ 0.15
RNF4-206ENST00000504782 HDLBPQ00341 1268 aaKnown RBP15.95■□□□□ 0.14
RNF4-206ENST00000504782 ATP2B3Q16720 1220 aa15.95■□□□□ 0.14
RNF4-206ENST00000504782 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
RNF4-206ENST00000504782 FRAT1Q92837 279 aaPredicted RBP15.95■□□□□ 0.14
RNF4-206ENST00000504782 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
RNF4-206ENST00000504782 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
RNF4-206ENST00000504782 ZDHHC15Q96MV8 337 aa15.95■□□□□ 0.14
RNF4-206ENST00000504782 CEP126Q9P2H0 1117 aa15.95■□□□□ 0.14
RNF4-206ENST00000504782 GPR25O00155 361 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 IGF2BP3O00425 579 aaKnown RBP eCLIP15.94■□□□□ 0.14
RNF4-206ENST00000504782 PHKA1P46020 1223 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 IREB2P48200 963 aaKnown RBP15.94■□□□□ 0.14
RNF4-206ENST00000504782 SREBF2Q12772 1141 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.94■□□□□ 0.14
RNF4-206ENST00000504782 IFNL1Q8IU54 200 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 ELP3Q9H9T3 547 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 COPRSQ9NQ92 184 aa15.94■□□□□ 0.14
RNF4-206ENST00000504782 PRDX5P30044 214 aa15.93■□□□□ 0.14
RNF4-206ENST00000504782 IL15P40933 162 aaPredicted RBP15.93■□□□□ 0.14
RNF4-206ENST00000504782 TIMM10P62072 90 aa15.93■□□□□ 0.14
RNF4-206ENST00000504782 DIXDC1Q155Q3 683 aa15.93■□□□□ 0.14
RNF4-206ENST00000504782 CTU1Q7Z7A3 348 aaKnown RBP15.93■□□□□ 0.14
RNF4-206ENST00000504782 ANKRD13AQ8IZ07 590 aa15.93■□□□□ 0.14
RNF4-206ENST00000504782 MRIQ9BWK5 157 aa15.93■□□□□ 0.14
RNF4-206ENST00000504782 FBXO3Q9UK99 471 aa15.93■□□□□ 0.14
RNF4-206ENST00000504782 MYH2Q9UKX2 1941 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 MANSC4A6NHS7 340 aaPredicted RBP15.92■□□□□ 0.14
RNF4-206ENST00000504782 ZBTB48P10074 688 aaPredicted RBP15.92■□□□□ 0.14
RNF4-206ENST00000504782 RGS19P49795 217 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 HHIPL2Q6UWX4 724 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 WDR66Q8TBY9 1149 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 OPTNQ96CV9 577 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 PTPN18Q99952 460 aa15.92■□□□□ 0.14
RNF4-206ENST00000504782 SRGAP3O43295 1099 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 TNNI2P48788 182 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
RNF4-206ENST00000504782 TFCP2Q12800 502 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 VGLL4Q14135 290 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
RNF4-206ENST00000504782 CCDC102BQ68D86 513 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.91■□□□□ 0.14
RNF4-206ENST00000504782 CFHR5Q9BXR6 569 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 SUGT1Q9Y2Z0 365 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 DAGLAQ9Y4D2 1042 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 AK9Q5TCS8 1911 aa15.91■□□□□ 0.14
RNF4-206ENST00000504782 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 GNAI3P08754 354 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 MTX1Q13505 466 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 MS4A4AQ96JQ5 239 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 MAST3O60307 1309 aa15.9■□□□□ 0.14
RNF4-206ENST00000504782 FKTNO75072 461 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 SOX10P56693 466 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 INHBEP58166 350 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 MAP3K9P80192 1104 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 CAP1Q01518 475 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 NFIAQ12857 509 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 MIGA2Q7L4E1 593 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 HPS5Q9UPZ3 1129 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
RNF4-206ENST00000504782 A0A1B0GUL7 405 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 TESPA1A2RU30 521 aaPredicted RBP15.88■□□□□ 0.13
RNF4-206ENST00000504782 IPO8O15397 1037 aaKnown RBP15.88■□□□□ 0.13
RNF4-206ENST00000504782 LDHBP07195 334 aaKnown RBP15.88■□□□□ 0.13
RNF4-206ENST00000504782 TCP10Q12799 353 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 CRHR2Q13324 411 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 RASGRF1Q13972 1273 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms