RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 WDHD1O75717 1129 aaPredicted RBP15.27■□□□□ 0.04
NEDD9-209ENST00000504634 GTF2A2P52657 109 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 MAP3K9P80192 1104 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 TAF1CQ15572 869 aaPredicted RBP15.27■□□□□ 0.04
NEDD9-209ENST00000504634 CCL15Q16663 113 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 SUCLG2Q96I99 432 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
NEDD9-209ENST00000504634 TMEM39BQ9GZU3 492 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 ANP32CO43423 234 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 VGLL4Q14135 290 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 CAVIN4Q5BKX8 364 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.26■□□□□ 0.03
NEDD9-209ENST00000504634 CDAN1Q8IWY9 1227 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 BRI3BPQ8WY22 251 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 ARMC5Q96C12 935 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 TEPSINQ96N21 525 aa15.26■□□□□ 0.03
NEDD9-209ENST00000504634 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
NEDD9-209ENST00000504634 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
NEDD9-209ENST00000504634 METTL24Q5JXM2 366 aa15.25■□□□□ 0.03
NEDD9-209ENST00000504634 TBC1D22AQ8WUA7 517 aa15.25■□□□□ 0.03
NEDD9-209ENST00000504634 TEKT1Q969V4 418 aa15.25■□□□□ 0.03
NEDD9-209ENST00000504634 TMOD2Q9NZR1 351 aa15.25■□□□□ 0.03
NEDD9-209ENST00000504634 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
NEDD9-209ENST00000504634 NBPF7P0C2Y1 421 aaPredicted RBP15.24■□□□□ 0.03
NEDD9-209ENST00000504634 EN2P19622 333 aaPredicted RBP15.24■□□□□ 0.03
NEDD9-209ENST00000504634 SLC9C1Q4G0N8 1177 aa15.24■□□□□ 0.03
NEDD9-209ENST00000504634 FBXO33Q7Z6M2 555 aa15.24■□□□□ 0.03
NEDD9-209ENST00000504634 NBPF11Q86T75 865 aa15.24■□□□□ 0.03
NEDD9-209ENST00000504634 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.24■□□□□ 0.03
NEDD9-209ENST00000504634 CACNB3P54284 484 aa15.23■□□□□ 0.03
NEDD9-209ENST00000504634 HDLBPQ00341 1268 aaKnown RBP15.23■□□□□ 0.03
NEDD9-209ENST00000504634 GRIK5Q16478 980 aa15.23■□□□□ 0.03
NEDD9-209ENST00000504634 KAZALD1Q96I82 304 aa15.23■□□□□ 0.03
NEDD9-209ENST00000504634 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
NEDD9-209ENST00000504634 SPDYE5A6NIY4 337 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 CETPP11597 493 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 KIF22Q14807 665 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 HOOK2Q96ED9 719 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
NEDD9-209ENST00000504634 HTTP42858 3142 aa15.21■□□□□ 0.03
NEDD9-209ENST00000504634 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
NEDD9-209ENST00000504634 CAP1Q01518 475 aa15.21■□□□□ 0.03
NEDD9-209ENST00000504634 LRRC24Q50LG9 513 aa15.21■□□□□ 0.03
NEDD9-209ENST00000504634 HABP4Q5JVS0 413 aaKnown RBP15.21■□□□□ 0.03
NEDD9-209ENST00000504634 ERO1BQ86YB8 467 aa15.21■□□□□ 0.03
NEDD9-209ENST00000504634 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
NEDD9-209ENST00000504634 ZNF333Q96JL9 665 aa15.21■□□□□ 0.03
NEDD9-209ENST00000504634 MAST3O60307 1309 aa15.2■□□□□ 0.02
NEDD9-209ENST00000504634 PDE8BO95263 885 aa15.2■□□□□ 0.02
NEDD9-209ENST00000504634 BCAMP50895 628 aa15.2■□□□□ 0.02
NEDD9-209ENST00000504634 SNAPC2Q13487 334 aa15.2■□□□□ 0.02
NEDD9-209ENST00000504634 RABL6Q3YEC7 729 aaPredicted RBP15.2■□□□□ 0.02
NEDD9-209ENST00000504634 DCAF15Q66K64 600 aa15.2■□□□□ 0.02
NEDD9-209ENST00000504634 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
NEDD9-209ENST00000504634 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
NEDD9-209ENST00000504634 UTYO14607 1347 aa15.19■□□□□ 0.02
NEDD9-209ENST00000504634 IFIT1P09914 478 aaKnown RBP15.19■□□□□ 0.02
NEDD9-209ENST00000504634 ZEB1P37275 1124 aaPredicted RBP15.19■□□□□ 0.02
NEDD9-209ENST00000504634 FAM83AQ86UY5 434 aa15.19■□□□□ 0.02
NEDD9-209ENST00000504634 SUGT1Q9Y2Z0 365 aa15.19■□□□□ 0.02
NEDD9-209ENST00000504634 SNCAIPQ9Y6H5 919 aa15.19■□□□□ 0.02
NEDD9-209ENST00000504634 MKI67P46013 3256 aaKnown RBP15.18■□□□□ 0.02
NEDD9-209ENST00000504634 ECM29Q5VYK3 1845 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 IRF6O14896 467 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 TLR2O60603 784 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 PPIL2Q13356 520 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
NEDD9-209ENST00000504634 FKBP1CQ5VVH2 108 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
NEDD9-209ENST00000504634 MIGA2Q7L4E1 593 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 ANKRD44Q8N8A2 993 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 KLHDC4Q8TBB5 520 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 MRIQ9BWK5 157 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 ZNF341Q9BYN7 854 aa15.18■□□□□ 0.02
NEDD9-209ENST00000504634 ZCCHC17Q9NP64 241 aaKnown RBP15.18■□□□□ 0.02
NEDD9-209ENST00000504634 CENPFP49454 3210 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 A0A1B0GUL6 1792 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
NEDD9-209ENST00000504634 LACTBP83111 547 aaPredicted RBP15.17■□□□□ 0.02
NEDD9-209ENST00000504634 HHIPL2Q6UWX4 724 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 ARHGAP39Q9C0H5 1083 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 PTPRCP08575 1304 aa15.17■□□□□ 0.02
NEDD9-209ENST00000504634 GNRH1P01148 92 aa15.16■□□□□ 0.02
NEDD9-209ENST00000504634 SLC5A1P13866 664 aa15.16■□□□□ 0.02
NEDD9-209ENST00000504634 PPATQ06203 517 aa15.16■□□□□ 0.02
NEDD9-209ENST00000504634 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
NEDD9-209ENST00000504634 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
NEDD9-209ENST00000504634 CACNA1FO60840 1977 aa15.16■□□□□ 0.02
NEDD9-209ENST00000504634 PRMT2P55345 433 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms