RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 FANCCQ00597 558 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 C19orf57Q0VDD7 668 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 ADGRE1Q14246 886 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 GALNT11Q8NCW6 608 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 GLIS3Q8NEA6 775 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 CARD10Q9BWT7 1032 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 SOX17Q9H6I2 414 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 GGT7Q9UJ14 662 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 SOX1O00570 391 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 ESRRAP11474 423 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 XRCC5P13010 732 aaKnown RBP7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 MBTPS1Q14703 1052 aa7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 SPRED3Q2MJR0 410 aa7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 HS2ST1Q7LGA3 356 aa7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 TMEM130Q8N3G9 435 aa7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 KLHDC7BQ96G42 594 aa7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
TRAPPC13-205ENST00000504243 USP31Q70CQ4 1352 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 FBXO24O75426 580 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 PCDH1Q08174 1060 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 CCDC85BQ15834 202 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 TPTE2Q6XPS3 522 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 TXNRD3Q86VQ6 643 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 DDX54Q8TDD1 881 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 CCSER2Q9H7U1 834 aa7.87□□□□□ -1.15
TRAPPC13-205ENST00000504243 TM4SF5O14894 197 aa7.86□□□□□ -1.15
TRAPPC13-205ENST00000504243 ST13P50502 369 aaKnown RBP7.86□□□□□ -1.15
TRAPPC13-205ENST00000504243 FOXD4L6Q3SYB3 417 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-205ENST00000504243 RPS26P11Q5JNZ5 115 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-205ENST00000504243 FOXD4L3Q6VB84 417 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-205ENST00000504243 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
TRAPPC13-205ENST00000504243 PROCP04070 461 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 DUOXA2Q1HG44 320 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 USP48Q86UV5 1035 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 AKTIPQ9H8T0 292 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 USP35Q9P2H5 1018 aa7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 GPN3Q9UHW5 284 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC13-205ENST00000504243 F8W735 103 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 ZNF157P51786 506 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 ZC3H6P61129 1189 aaKnown RBP7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 ZNF394Q53GI3 561 aa7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 C3orf58Q8NDZ4 430 aa7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 KCNK4Q9NYG8 393 aa7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 PCDHGB7Q9Y5F8 929 aa7.84□□□□□ -1.15
TRAPPC13-205ENST00000504243 F6X3S4 739 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 B3GALT4O96024 378 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 IREB2P48200 963 aaKnown RBP7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 NLRP12P59046 1061 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 GSTM4Q03013 218 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 ZNF423Q2M1K9 1284 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 ACAD11Q709F0 780 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 CEP44Q9C0F1 390 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC13-205ENST00000504243 DDX3YO15523 660 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 ADAM11O75078 769 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 CYP11A1P05108 521 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 NOS3P29474 1203 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 NAALADL2Q58DX5 795 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 HGSNATQ68CP4 663 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 ZNF654Q8IZM8 581 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 CAPN10Q9HC96 672 aa7.82□□□□□ -1.16
TRAPPC13-205ENST00000504243 MINDY4BA8MYZ0 360 aa7.81□□□□□ -1.16
TRAPPC13-205ENST00000504243 LMNB1P20700 586 aa7.81□□□□□ -1.16
TRAPPC13-205ENST00000504243 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
TRAPPC13-205ENST00000504243 CEP41Q9BYV8 373 aa7.81□□□□□ -1.16
TRAPPC13-205ENST00000504243 ACBD3Q9H3P7 528 aa7.81□□□□□ -1.16
TRAPPC13-205ENST00000504243 WISP1O95388 367 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 GBP2P32456 591 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 RAD51AP2Q09MP3 1159 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 GNL2Q13823 731 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 HP1BP3Q5SSJ5 553 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 KIAA1211Q6ZU35 1233 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 SV2BQ7L1I2 683 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 UBASH3BQ8TF42 649 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 TRIM56Q9BRZ2 755 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 RUSC1Q9BVN2 902 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 USP26Q9BXU7 913 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 RNF208Q9H0X6 261 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 COPRSQ9NQ92 184 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 KBTBD4Q9NVX7 518 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 INPP5FQ9Y2H2 1132 aa7.8□□□□□ -1.16
TRAPPC13-205ENST00000504243 MEGF11A6BM72 1044 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 ALX3O95076 343 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 CELA3AP09093 270 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 AP3B2Q13367 1082 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 PWP1Q13610 501 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 DOC2BQ14184 412 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 POU4F3Q15319 338 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms