RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MAGEA10P43363 369 aaPredicted RBP16.32■□□□□ 0.2
LSM6-204ENST00000504181 MAP3K9P80192 1104 aa16.32■□□□□ 0.2
LSM6-204ENST00000504181 PRKCZQ05513 592 aa16.32■□□□□ 0.2
LSM6-204ENST00000504181 FAM161BQ96MY7 647 aa16.32■□□□□ 0.2
LSM6-204ENST00000504181 ZCCHC17Q9NP64 241 aaKnown RBP16.32■□□□□ 0.2
LSM6-204ENST00000504181 BSDC1Q9NW68 430 aaPredicted RBP16.32■□□□□ 0.2
LSM6-204ENST00000504181 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
LSM6-204ENST00000504181 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
LSM6-204ENST00000504181 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
LSM6-204ENST00000504181 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
LSM6-204ENST00000504181 SLAIN1Q8ND83 568 aa16.31■□□□□ 0.2
LSM6-204ENST00000504181 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
LSM6-204ENST00000504181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■□□ 15.6
LSM6-204ENST00000504181 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
LSM6-204ENST00000504181 DEFB118Q96PH6 123 aa16.31■□□□□ 0.2
LSM6-204ENST00000504181 MUC3AQ02505 3323 aa16.31■□□□□ 0.2
LSM6-204ENST00000504181 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
LSM6-204ENST00000504181 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
LSM6-204ENST00000504181 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
LSM6-204ENST00000504181 MYD88Q99836 296 aa16.3■□□□□ 0.2
LSM6-204ENST00000504181 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
LSM6-204ENST00000504181 LEMD3Q9Y2U8 911 aa16.3■□□□□ 0.2
LSM6-204ENST00000504181 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
LSM6-204ENST00000504181 NECAB2Q7Z6G3 386 aa16.29■□□□□ 0.2
LSM6-204ENST00000504181 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
LSM6-204ENST00000504181 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
LSM6-204ENST00000504181 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
LSM6-204ENST00000504181 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
LSM6-204ENST00000504181 IRF6O14896 467 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 ELNP15502 786 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 CTSWP56202 376 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 TNFAIP1Q13829 316 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 GREM2Q9H772 168 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 SNCAIPQ9Y6H5 919 aa16.28■□□□□ 0.2
LSM6-204ENST00000504181 PTPRFP10586 1907 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 ADGRA2Q96PE1 1338 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 ADCY3O60266 1144 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 INHAP05111 366 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 ERO1BQ86YB8 467 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 CCDC191Q8NCU4 936 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 TMEM39BQ9GZU3 492 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 HYPKQ9NX55 129 aa16.27■□□□□ 0.2
LSM6-204ENST00000504181 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
LSM6-204ENST00000504181 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
LSM6-204ENST00000504181 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
LSM6-204ENST00000504181 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
LSM6-204ENST00000504181 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
LSM6-204ENST00000504181 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
LSM6-204ENST00000504181 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
LSM6-204ENST00000504181 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 PDHXO00330 501 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 PLA2G5P39877 138 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 KCNJ4P48050 445 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 FCGRTP55899 365 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 RIPK4P57078 832 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 PPIL2Q13356 520 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 ZKSCAN4Q969J2 545 aaPredicted RBP16.25■□□□□ 0.19
LSM6-204ENST00000504181 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 PAK6Q9NQU5 681 aaPredicted RBP16.25■□□□□ 0.19
LSM6-204ENST00000504181 DNAH12Q6ZR08 3092 aa16.25■□□□□ 0.19
LSM6-204ENST00000504181 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
LSM6-204ENST00000504181 CAPN2P17655 700 aa16.24■□□□□ 0.19
LSM6-204ENST00000504181 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
LSM6-204ENST00000504181 MAFAQ8NHW3 353 aaPredicted RBP16.24■□□□□ 0.19
LSM6-204ENST00000504181 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
LSM6-204ENST00000504181 CDH23Q9H251 3354 aa16.23■□□□□ 0.19
LSM6-204ENST00000504181 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
LSM6-204ENST00000504181 ANKRD23Q86SG2 305 aa16.23■□□□□ 0.19
LSM6-204ENST00000504181 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.23■□□□□ 0.19
LSM6-204ENST00000504181 ANKRD2Q9GZV1 360 aa16.23■□□□□ 0.19
LSM6-204ENST00000504181 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
LSM6-204ENST00000504181 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
LSM6-204ENST00000504181 FRMPD3Q5JV73 1810 aa16.23■□□□□ 0.19
LSM6-204ENST00000504181 FAM205AQ6ZU69 1335 aa16.22■□□□□ 0.19
LSM6-204ENST00000504181 SNAP23O00161 211 aa16.22■□□□□ 0.19
LSM6-204ENST00000504181 FLT3LGP49771 235 aa16.22■□□□□ 0.19
LSM6-204ENST00000504181 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
LSM6-204ENST00000504181 FAM122AQ96E09 287 aa16.22■□□□□ 0.19
LSM6-204ENST00000504181 MAST2Q6P0Q8 1798 aa16.21■□□□□ 0.19
LSM6-204ENST00000504181 TNNI2P48788 182 aa16.21■□□□□ 0.19
LSM6-204ENST00000504181 FKBP1AP62942 108 aaKnown RBP16.21■□□□□ 0.19
LSM6-204ENST00000504181 ZNF697Q5TEC3 545 aa16.21■□□□□ 0.19
LSM6-204ENST00000504181 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
LSM6-204ENST00000504181 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
LSM6-204ENST00000504181 HOXB7P09629 217 aa16.2■□□□□ 0.18
LSM6-204ENST00000504181 BCRP11274 1271 aa16.2■□□□□ 0.18
LSM6-204ENST00000504181 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
LSM6-204ENST00000504181 ANKLE1Q8NAG6 615 aa16.2■□□□□ 0.18
LSM6-204ENST00000504181 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
LSM6-204ENST00000504181 CDX2Q99626 313 aaPredicted RBP16.2■□□□□ 0.18
LSM6-204ENST00000504181 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
LSM6-204ENST00000504181 PNNQ9H307 717 aaKnown RBP16.2■□□□□ 0.18
LSM6-204ENST00000504181 PLXNB2O15031 1838 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 CHL1O00533 1208 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 IL1R1P14778 569 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 MDM2Q00987 491 aaPredicted RBP16.19■□□□□ 0.18
LSM6-204ENST00000504181 CHRNDQ07001 517 aa16.19■□□□□ 0.18
LSM6-204ENST00000504181 ZNF804AQ7Z570 1209 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms