RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 ZNF157P51786 506 aaPredicted RBP22.11■■□□□ 1.13
NFKB1-204ENST00000504044 POLA2Q14181 598 aa22.11■■□□□ 1.13
NFKB1-204ENST00000504044 SUPT20HL1Q3ZLR7 823 aa22.11■■□□□ 1.13
NFKB1-204ENST00000504044 CCDC102BQ68D86 513 aa22.11■■□□□ 1.13
NFKB1-204ENST00000504044 DLK2Q6UY11 383 aa22.11■■□□□ 1.13
NFKB1-204ENST00000504044 PRMT6Q96LA8 375 aaPredicted RBP22.11■■□□□ 1.13
NFKB1-204ENST00000504044 CLRN2A0PK11 232 aa22.1■■□□□ 1.13
NFKB1-204ENST00000504044 SURF6O75683 361 aaKnown RBP22.1■■□□□ 1.13
NFKB1-204ENST00000504044 C1orf115Q9H7X2 142 aa22.1■■□□□ 1.13
NFKB1-204ENST00000504044 ZNF646O15015 1829 aaPredicted RBP22.09■■□□□ 1.13
NFKB1-204ENST00000504044 LDHBP07195 334 aaKnown RBP22.09■■□□□ 1.13
NFKB1-204ENST00000504044 CTCFP49711 727 aaPredicted RBP22.09■■□□□ 1.13
NFKB1-204ENST00000504044 TIMM10P62072 90 aa22.09■■□□□ 1.13
NFKB1-204ENST00000504044 XAGE2Q96GT9 111 aa22.09■■□□□ 1.13
NFKB1-204ENST00000504044 WBP1LQ9NX94 342 aa22.09■■□□□ 1.13
NFKB1-204ENST00000504044 PDS5AQ29RF7 1337 aaKnown RBP22.08■■□□□ 1.13
NFKB1-204ENST00000504044 SALL1Q9NSC2 1324 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 CA12O43570 354 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 PPP1R12BO60237 982 aaPredicted RBP22.08■■□□□ 1.13
NFKB1-204ENST00000504044 HMMRO75330 724 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 PHKA1P46020 1223 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 SPDYE2Q495Y8 402 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 HSP90AB4PQ58FF6 505 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 SPTY2D1Q68D10 685 aaPredicted RBP22.08■■□□□ 1.13
NFKB1-204ENST00000504044 HHIPL2Q6UWX4 724 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 SLF2Q8IX21 1173 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 REM2Q8IYK8 340 aaPredicted RBP22.08■■□□□ 1.13
NFKB1-204ENST00000504044 GPR108Q9NPR9 543 aa22.08■■□□□ 1.13
NFKB1-204ENST00000504044 ZNF70Q9UC06 446 aaPredicted RBP22.08■■□□□ 1.13
NFKB1-204ENST00000504044 SCAF8Q9UPN6 1271 aaKnown RBP22.08■■□□□ 1.13
NFKB1-204ENST00000504044 PDE3AQ14432 1141 aa22.07■■□□□ 1.12
NFKB1-204ENST00000504044 PRAMEF18Q5VWM3 479 aa22.07■■□□□ 1.12
NFKB1-204ENST00000504044 ERC1Q8IUD2 1116 aa22.07■■□□□ 1.12
NFKB1-204ENST00000504044 ZDHHC15Q96MV8 337 aa22.07■■□□□ 1.12
NFKB1-204ENST00000504044 TDRD3Q9H7E2 651 aaKnown RBP22.07■■□□□ 1.12
NFKB1-204ENST00000504044 UQCRFS1P1P0C7P4 283 aa22.06■■□□□ 1.12
NFKB1-204ENST00000504044 ADORA1P30542 326 aa22.06■■□□□ 1.12
NFKB1-204ENST00000504044 CEP85Q6P2H3 762 aa22.06■■□□□ 1.12
NFKB1-204ENST00000504044 COG6Q9Y2V7 657 aa22.06■■□□□ 1.12
NFKB1-204ENST00000504044 NOP58Q9Y2X3 529 aaKnown RBP22.06■■□□□ 1.12
NFKB1-204ENST00000504044 PAPPA2Q9BXP8 1791 aa22.06■■□□□ 1.12
NFKB1-204ENST00000504044 AOC2O75106 756 aa22.05■■□□□ 1.12
NFKB1-204ENST00000504044 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
NFKB1-204ENST00000504044 RPAP2Q8IXW5 612 aaPredicted RBP22.05■■□□□ 1.12
NFKB1-204ENST00000504044 HOOK2Q96ED9 719 aa22.05■■□□□ 1.12
NFKB1-204ENST00000504044 PCDHAC2Q9Y5I4 1007 aa22.05■■□□□ 1.12
NFKB1-204ENST00000504044 UNCXA6NJT0 531 aa22.04■■□□□ 1.12
NFKB1-204ENST00000504044 SLC10A3P09131 477 aa22.04■■□□□ 1.12
NFKB1-204ENST00000504044 RASA3Q14644 834 aa22.04■■□□□ 1.12
NFKB1-204ENST00000504044 DZIP1Q86YF9 867 aaKnown RBP22.04■■□□□ 1.12
NFKB1-204ENST00000504044 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
NFKB1-204ENST00000504044 FOXN1O15353 648 aa22.03■■□□□ 1.12
NFKB1-204ENST00000504044 IREB2P48200 963 aaKnown RBP22.03■■□□□ 1.12
NFKB1-204ENST00000504044 RASGRF1Q13972 1273 aa22.03■■□□□ 1.12
NFKB1-204ENST00000504044 TNNI3KQ59H18 835 aa22.03■■□□□ 1.12
NFKB1-204ENST00000504044 ABCF2Q9UG63 623 aa22.03■■□□□ 1.12
NFKB1-204ENST00000504044 ANGEL1Q9UNK9 670 aaKnown RBP22.03■■□□□ 1.12
NFKB1-204ENST00000504044 FPGT-TNNI3KV9GXZ4 949 aa22.03■■□□□ 1.12
NFKB1-204ENST00000504044 TCP10L2B9ZVM9 353 aa22.02■■□□□ 1.12
NFKB1-204ENST00000504044 UBE2Q2LH0YL09 131 aa22.02■■□□□ 1.12
NFKB1-204ENST00000504044 GRIK5Q16478 980 aa22.02■■□□□ 1.12
NFKB1-204ENST00000504044 TTC39AQ5SRH9 613 aa22.02■■□□□ 1.12
NFKB1-204ENST00000504044 FKBP1CQ5VVH2 108 aa22.02■■□□□ 1.12
NFKB1-204ENST00000504044 PRDM10Q9NQV6 1147 aa22.02■■□□□ 1.12
NFKB1-204ENST00000504044 PRDX5P30044 214 aa22.01■■□□□ 1.11
NFKB1-204ENST00000504044 PRKG1Q13976 671 aa22.01■■□□□ 1.11
NFKB1-204ENST00000504044 ERICH6Q7L0X2 663 aa22.01■■□□□ 1.11
NFKB1-204ENST00000504044 POLR2AP24928 1970 aaKnown RBP22■■□□□ 1.11
NFKB1-204ENST00000504044 FAM155AB1AL88 458 aaPredicted RBP22■■□□□ 1.11
NFKB1-204ENST00000504044 ARID4AP29374 1257 aaPredicted RBP22■■□□□ 1.11
NFKB1-204ENST00000504044 GSTO1P78417 241 aa22■■□□□ 1.11
NFKB1-204ENST00000504044 MAP3K11Q16584 847 aa22■■□□□ 1.11
NFKB1-204ENST00000504044 FAM83AQ86UY5 434 aa22■■□□□ 1.11
NFKB1-204ENST00000504044 RASAL3Q86YV0 1011 aa22■■□□□ 1.11
NFKB1-204ENST00000504044 SPATA5Q8NB90 893 aa22■■□□□ 1.11
NFKB1-204ENST00000504044 ZBTB40Q9NUA8 1239 aa22■■□□□ 1.11
NFKB1-204ENST00000504044 THSD7BQ9C0I4 1608 aa21.99■■□□□ 1.11
NFKB1-204ENST00000504044 APOBEC3HQ6NTF7 200 aaKnown RBP21.99■■□□□ 1.11
NFKB1-204ENST00000504044 MOB2Q70IA6 237 aa21.99■■□□□ 1.11
NFKB1-204ENST00000504044 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
NFKB1-204ENST00000504044 IGSF3O75054 1194 aa21.98■■□□□ 1.11
NFKB1-204ENST00000504044 LDHCP07864 332 aa21.98■■□□□ 1.11
NFKB1-204ENST00000504044 KIF23Q02241 960 aaPredicted RBP21.98■■□□□ 1.11
NFKB1-204ENST00000504044 NBPF12Q5TAG4 269 aaPredicted RBP21.98■■□□□ 1.11
NFKB1-204ENST00000504044 SLC10A4Q96EP9 437 aa21.98■■□□□ 1.11
NFKB1-204ENST00000504044 DAGLAQ9Y4D2 1042 aa21.98■■□□□ 1.11
NFKB1-204ENST00000504044 DIXDC1Q155Q3 683 aa21.97■■□□□ 1.11
NFKB1-204ENST00000504044 LDLRAD1Q5T700 205 aa21.97■■□□□ 1.11
NFKB1-204ENST00000504044 ANKRD13AQ8IZ07 590 aa21.97■■□□□ 1.11
NFKB1-204ENST00000504044 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
NFKB1-204ENST00000504044 LBX1P52954 281 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 SREBF2Q12772 1141 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 DCAF15Q66K64 600 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 NOL10Q9BSC4 688 aaKnown RBP21.96■■□□□ 1.11
NFKB1-204ENST00000504044 SAGE1Q9NXZ1 904 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 LRP2BPQ9P2M1 347 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 EXOC6BQ9Y2D4 811 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 AOX1Q06278 1338 aa21.96■■□□□ 1.11
NFKB1-204ENST00000504044 ECM29Q5VYK3 1845 aa21.95■■□□□ 1.1
NFKB1-204ENST00000504044 RAB11FIP3O75154 756 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms