RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 HNRNPUQ00839 825 aaKnown RBP eCLIP27.46■■□□□ 1.99
LSM6-203ENST00000503982 NBPF12Q5TAG4 269 aaPredicted RBP27.46■■□□□ 1.99
LSM6-203ENST00000503982 MEIS3Q99687 375 aa27.46■■□□□ 1.99
LSM6-203ENST00000503982 TCP10L2B9ZVM9 353 aa27.45■■□□□ 1.98
LSM6-203ENST00000503982 FGFR2P21802 821 aa27.45■■□□□ 1.98
LSM6-203ENST00000503982 TNNI2P48788 182 aa27.45■■□□□ 1.98
LSM6-203ENST00000503982 SREBF2Q12772 1141 aa27.45■■□□□ 1.98
LSM6-203ENST00000503982 SPDYE2Q495Y8 402 aa27.45■■□□□ 1.98
LSM6-203ENST00000503982 GNAI3P08754 354 aa27.44■■□□□ 1.98
LSM6-203ENST00000503982 IREB2P48200 963 aaKnown RBP27.44■■□□□ 1.98
LSM6-203ENST00000503982 GRIK5Q16478 980 aa27.44■■□□□ 1.98
LSM6-203ENST00000503982 ATP2B3Q16720 1220 aa27.44■■□□□ 1.98
LSM6-203ENST00000503982 ARHGAP45Q92619 1136 aa27.44■■□□□ 1.98
LSM6-203ENST00000503982 TEKT1Q969V4 418 aa27.44■■□□□ 1.98
LSM6-203ENST00000503982 MAST3O60307 1309 aa27.43■■□□□ 1.98
LSM6-203ENST00000503982 ATG9AQ7Z3C6 839 aa27.43■■□□□ 1.98
LSM6-203ENST00000503982 TMOD2Q9NZR1 351 aa27.43■■□□□ 1.98
LSM6-203ENST00000503982 FBXO3Q9UK99 471 aa27.43■■□□□ 1.98
LSM6-203ENST00000503982 PA2G4Q9UQ80 394 aaKnown RBP27.43■■□□□ 1.98
LSM6-203ENST00000503982 CIAO1O76071 339 aa27.42■■□□□ 1.98
LSM6-203ENST00000503982 LDLRAD1Q5T700 205 aa27.42■■□□□ 1.98
LSM6-203ENST00000503982 SSC5DA1L4H1 1573 aa27.42■■□□□ 1.98
LSM6-203ENST00000503982 BCAR3O75815 825 aa27.41■■□□□ 1.98
LSM6-203ENST00000503982 TBC1D8O95759 1140 aa27.41■■□□□ 1.98
LSM6-203ENST00000503982 IL15P40933 162 aaPredicted RBP27.41■■□□□ 1.98
LSM6-203ENST00000503982 INTS3Q68E01 1043 aaKnown RBP27.41■■□□□ 1.98
LSM6-203ENST00000503982 CLUAP1Q96AJ1 413 aa27.41■■□□□ 1.98
LSM6-203ENST00000503982 GNL3LQ9NVN8 582 aaKnown RBP27.41■■□□□ 1.98
LSM6-203ENST00000503982 SPRYD7Q5W111 196 aa27.4■■□□□ 1.98
LSM6-203ENST00000503982 WDR66Q8TBY9 1149 aa27.4■■□□□ 1.98
LSM6-203ENST00000503982 CLMNQ96JQ2 1002 aa27.4■■□□□ 1.98
LSM6-203ENST00000503982 HDLBPQ00341 1268 aaKnown RBP27.39■■□□□ 1.98
LSM6-203ENST00000503982 MAP3K11Q16584 847 aa27.39■■□□□ 1.98
LSM6-203ENST00000503982 AK9Q5TCS8 1911 aa27.38■■□□□ 1.97
LSM6-203ENST00000503982 SRGAP3O43295 1099 aa27.38■■□□□ 1.97
LSM6-203ENST00000503982 TM4SF4P48230 202 aa27.38■■□□□ 1.97
LSM6-203ENST00000503982 CACNB3P54284 484 aa27.38■■□□□ 1.97
LSM6-203ENST00000503982 ATF7IPQ6VMQ6 1270 aa27.38■■□□□ 1.97
LSM6-203ENST00000503982 TMEM39BQ9GZU3 492 aa27.38■■□□□ 1.97
LSM6-203ENST00000503982 USP2O75604 605 aaPredicted RBP27.37■■□□□ 1.97
LSM6-203ENST00000503982 ANKRD13AQ8IZ07 590 aa27.37■■□□□ 1.97
LSM6-203ENST00000503982 WNK4Q96J92 1243 aa27.37■■□□□ 1.97
LSM6-203ENST00000503982 TNNQ9UQP3 1299 aa27.37■■□□□ 1.97
LSM6-203ENST00000503982 SUGT1Q9Y2Z0 365 aa27.37■■□□□ 1.97
LSM6-203ENST00000503982 OTOFQ9HC10 1997 aa27.37■■□□□ 1.97
LSM6-203ENST00000503982 MANSC4A6NHS7 340 aaPredicted RBP27.36■■□□□ 1.97
LSM6-203ENST00000503982 TRIM27P14373 513 aa27.36■■□□□ 1.97
LSM6-203ENST00000503982 COPRSQ9NQ92 184 aa27.36■■□□□ 1.97
LSM6-203ENST00000503982 ZDHHC15Q96MV8 337 aa27.35■■□□□ 1.97
LSM6-203ENST00000503982 ELP3Q9H9T3 547 aa27.35■■□□□ 1.97
LSM6-203ENST00000503982 GNAI2P04899 355 aa27.34■■□□□ 1.97
LSM6-203ENST00000503982 ZBTB48P10074 688 aaPredicted RBP27.34■■□□□ 1.97
LSM6-203ENST00000503982 ZKSCAN2Q63HK3 967 aa27.34■■□□□ 1.97
LSM6-203ENST00000503982 CTU1Q7Z7A3 348 aaKnown RBP27.34■■□□□ 1.97
LSM6-203ENST00000503982 UNCXA6NJT0 531 aa27.33■■□□□ 1.97
LSM6-203ENST00000503982 CDAN1Q8IWY9 1227 aa27.33■■□□□ 1.97
LSM6-203ENST00000503982 DENND2AQ9ULE3 1009 aa27.33■■□□□ 1.97
LSM6-203ENST00000503982 ALDH1A1P00352 501 aa27.32■■□□□ 1.96
LSM6-203ENST00000503982 LDHBP07195 334 aaKnown RBP27.32■■□□□ 1.96
LSM6-203ENST00000503982 PHKA1P46020 1223 aa27.32■■□□□ 1.96
LSM6-203ENST00000503982 INHBEP58166 350 aa27.32■■□□□ 1.96
LSM6-203ENST00000503982 HHIPL2Q6UWX4 724 aa27.32■■□□□ 1.96
LSM6-203ENST00000503982 TEPSINQ96N21 525 aa27.32■■□□□ 1.96
LSM6-203ENST00000503982 MRIQ9BWK5 157 aa27.32■■□□□ 1.96
LSM6-203ENST00000503982 ADORA1P30542 326 aa27.31■■□□□ 1.96
LSM6-203ENST00000503982 TIMM10P62072 90 aa27.31■■□□□ 1.96
LSM6-203ENST00000503982 ZNF296Q8WUU4 475 aaPredicted RBP27.31■■□□□ 1.96
LSM6-203ENST00000503982 AKAP2Q9Y2D5 859 aa27.31■■□□□ 1.96
LSM6-203ENST00000503982 CSADQ9Y600 493 aa27.31■■□□□ 1.96
LSM6-203ENST00000503982 GPR25O00155 361 aa27.3■■□□□ 1.96
LSM6-203ENST00000503982 TFCP2Q12800 502 aa27.3■■□□□ 1.96
LSM6-203ENST00000503982 OTUD7BQ6GQQ9 843 aa27.3■■□□□ 1.96
LSM6-203ENST00000503982 FTSJ3Q8IY81 847 aaKnown RBP27.3■■□□□ 1.96
LSM6-203ENST00000503982 NEUROD6Q96NK8 337 aa27.3■■□□□ 1.96
LSM6-203ENST00000503982 SEMA3EO15041 775 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 PRDX5P30044 214 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 CCDC102BQ68D86 513 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 APOBEC3HQ6NTF7 200 aaKnown RBP27.29■■□□□ 1.96
LSM6-203ENST00000503982 IFNL1Q8IU54 200 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 TMEM57Q8N5G2 664 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 OPTNQ96CV9 577 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 HOOK2Q96ED9 719 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 MYH2Q9UKX2 1941 aa27.29■■□□□ 1.96
LSM6-203ENST00000503982 A0A1B0GUL7 405 aa27.28■■□□□ 1.96
LSM6-203ENST00000503982 MAP3K9P80192 1104 aa27.28■■□□□ 1.96
LSM6-203ENST00000503982 G3BP1Q13283 466 aaKnown RBP eCLIP27.28■■□□□ 1.96
LSM6-203ENST00000503982 DIXDC1Q155Q3 683 aa27.28■■□□□ 1.96
LSM6-203ENST00000503982 GORABQ5T7V8 394 aa27.28■■□□□ 1.96
LSM6-203ENST00000503982 FKTNO75072 461 aa27.27■■□□□ 1.96
LSM6-203ENST00000503982 FAM83AQ86UY5 434 aa27.27■■□□□ 1.96
LSM6-203ENST00000503982 ZGPATQ8N5A5 531 aaKnown RBP27.27■■□□□ 1.96
LSM6-203ENST00000503982 ABCF2Q9UG63 623 aa27.27■■□□□ 1.96
LSM6-203ENST00000503982 DAGLAQ9Y4D2 1042 aa27.27■■□□□ 1.96
LSM6-203ENST00000503982 GJA5P36382 358 aa27.26■■□□□ 1.95
LSM6-203ENST00000503982 MTX1Q13505 466 aa27.26■■□□□ 1.95
LSM6-203ENST00000503982 DZIP1Q86YF9 867 aaKnown RBP27.26■■□□□ 1.95
LSM6-203ENST00000503982 LAMB1P07942 1786 aa27.26■■□□□ 1.95
LSM6-203ENST00000503982 VGLL4Q14135 290 aa27.25■■□□□ 1.95
LSM6-203ENST00000503982 MVPQ14764 893 aaKnown RBP27.25■■□□□ 1.95
LSM6-203ENST00000503982 FKBP1CQ5VVH2 108 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms