RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SLC10A4Q96EP9 437 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 CFHR5Q9BXR6 569 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 CEP126Q9P2H0 1117 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 IQSEC3Q9UPP2 1182 aaPredicted RBP14.91□□□□□ -0.02
MED28-203ENST00000503945 PPP2R3BQ9Y5P8 575 aa14.91□□□□□ -0.02
MED28-203ENST00000503945 GNAI3P08754 354 aa14.9□□□□□ -0.02
MED28-203ENST00000503945 SLC5A1P13866 664 aa14.9□□□□□ -0.02
MED28-203ENST00000503945 TNFAIP1Q13829 316 aa14.9□□□□□ -0.02
MED28-203ENST00000503945 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
MED28-203ENST00000503945 FBXO46Q6PJ61 603 aaPredicted RBP14.9□□□□□ -0.02
MED28-203ENST00000503945 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
MED28-203ENST00000503945 MRIQ9BWK5 157 aa14.9□□□□□ -0.02
MED28-203ENST00000503945 ECM29Q5VYK3 1845 aa14.89□□□□□ -0.03
MED28-203ENST00000503945 HDLBPQ00341 1268 aaKnown RBP14.89□□□□□ -0.03
MED28-203ENST00000503945 RASA3Q14644 834 aa14.89□□□□□ -0.03
MED28-203ENST00000503945 MAP3K11Q16584 847 aa14.89□□□□□ -0.03
MED28-203ENST00000503945 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
MED28-203ENST00000503945 CLMNQ96JQ2 1002 aa14.89□□□□□ -0.03
MED28-203ENST00000503945 SIL1Q9H173 461 aa14.89□□□□□ -0.03
MED28-203ENST00000503945 TDRD3Q9H7E2 651 aaKnown RBP14.89□□□□□ -0.03
MED28-203ENST00000503945 GNL3LQ9NVN8 582 aaKnown RBP14.89□□□□□ -0.03
MED28-203ENST00000503945 ZNF70Q9UC06 446 aaPredicted RBP14.89□□□□□ -0.03
MED28-203ENST00000503945 LRRFIP2Q9Y608 721 aaKnown RBP14.89□□□□□ -0.03
MED28-203ENST00000503945 KIF16BQ96L93 1317 aa14.89□□□□□ -0.03
MED28-203ENST00000503945 A0A1B0GUL6 1792 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 UNCXA6NJT0 531 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 CIAO1O76071 339 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 FGFR2P21802 821 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 IL15P40933 162 aaPredicted RBP14.88□□□□□ -0.03
MED28-203ENST00000503945 CRKP46108 304 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 INHBEP58166 350 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 PRPF38BQ5VTL8 546 aaKnown RBP14.88□□□□□ -0.03
MED28-203ENST00000503945 ATG9AQ7Z3C6 839 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 PCDH10Q9P2E7 1040 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 SUGT1Q9Y2Z0 365 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 AOX1Q06278 1338 aa14.88□□□□□ -0.03
MED28-203ENST00000503945 MANSC4A6NHS7 340 aaPredicted RBP14.87□□□□□ -0.03
MED28-203ENST00000503945 ALDH1A1P00352 501 aa14.87□□□□□ -0.03
MED28-203ENST00000503945 TNNI2P48788 182 aa14.87□□□□□ -0.03
MED28-203ENST00000503945 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
MED28-203ENST00000503945 NBPF12Q5TAG4 269 aaPredicted RBP14.87□□□□□ -0.03
MED28-203ENST00000503945 WDR66Q8TBY9 1149 aa14.87□□□□□ -0.03
MED28-203ENST00000503945 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
MED28-203ENST00000503945 WNK4Q96J92 1243 aa14.87□□□□□ -0.03
MED28-203ENST00000503945 MEIS3Q99687 375 aa14.87□□□□□ -0.03
MED28-203ENST00000503945 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
MED28-203ENST00000503945 USP2O75604 605 aaPredicted RBP14.86□□□□□ -0.03
MED28-203ENST00000503945 BCAR3O75815 825 aa14.86□□□□□ -0.03
MED28-203ENST00000503945 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
MED28-203ENST00000503945 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
MED28-203ENST00000503945 ATF7IPQ6VMQ6 1270 aa14.86□□□□□ -0.03
MED28-203ENST00000503945 COPRSQ9NQ92 184 aa14.86□□□□□ -0.03
MED28-203ENST00000503945 COL1A1P02452 1464 aaPredicted RBP14.86□□□□□ -0.03
MED28-203ENST00000503945 SSC5DA1L4H1 1573 aa14.85□□□□□ -0.03
MED28-203ENST00000503945 TCP10L2B9ZVM9 353 aa14.85□□□□□ -0.03
MED28-203ENST00000503945 SRGAP3O43295 1099 aa14.85□□□□□ -0.03
MED28-203ENST00000503945 ZBTB48P10074 688 aaPredicted RBP14.85□□□□□ -0.03
MED28-203ENST00000503945 GJA5P36382 358 aa14.85□□□□□ -0.03
MED28-203ENST00000503945 GRIK5Q16478 980 aa14.85□□□□□ -0.03
MED28-203ENST00000503945 ATP2B3Q16720 1220 aa14.85□□□□□ -0.03
MED28-203ENST00000503945 TRIM27P14373 513 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 HHIPL2Q6UWX4 724 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 OTOP1Q7RTM1 612 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 TMOD2Q9NZR1 351 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
MED28-203ENST00000503945 AKAP2Q9Y2D5 859 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 TRIM17Q9Y577 477 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 MAST3O60307 1309 aa14.84□□□□□ -0.03
MED28-203ENST00000503945 LAMB1P07942 1786 aa14.83□□□□□ -0.03
MED28-203ENST00000503945 GNAI2P04899 355 aa14.83□□□□□ -0.04
MED28-203ENST00000503945 TIMM10P62072 90 aa14.83□□□□□ -0.04
MED28-203ENST00000503945 ZKSCAN2Q63HK3 967 aa14.83□□□□□ -0.04
MED28-203ENST00000503945 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
MED28-203ENST00000503945 PTPN18Q99952 460 aa14.83□□□□□ -0.04
MED28-203ENST00000503945 DENND2AQ9ULE3 1009 aa14.83□□□□□ -0.04
MED28-203ENST00000503945 APOBEC3HQ6NTF7 200 aaKnown RBP14.82□□□□□ -0.04
MED28-203ENST00000503945 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
MED28-203ENST00000503945 TMEM39BQ9GZU3 492 aa14.82□□□□□ -0.04
MED28-203ENST00000503945 POTEFA5A3E0 1075 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 SEMA3EO15041 775 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 LDHBP07195 334 aaKnown RBP14.81□□□□□ -0.04
MED28-203ENST00000503945 MAP3K9P80192 1104 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 G3BP1Q13283 466 aaKnown RBP eCLIP14.81□□□□□ -0.04
MED28-203ENST00000503945 CRHR2Q13324 411 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 FKBP1CQ5VVH2 108 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 OTUD7BQ6GQQ9 843 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 CD99L2Q8TCZ2 262 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 TEPSINQ96N21 525 aa14.81□□□□□ -0.04
MED28-203ENST00000503945 TESPA1A2RU30 521 aaPredicted RBP14.8□□□□□ -0.04
MED28-203ENST00000503945 CAP1Q01518 475 aa14.8□□□□□ -0.04
MED28-203ENST00000503945 MTX1Q13505 466 aa14.8□□□□□ -0.04
MED28-203ENST00000503945 FAM83AQ86UY5 434 aa14.8□□□□□ -0.04
MED28-203ENST00000503945 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
MED28-203ENST00000503945 ZGPATQ8N5A5 531 aaKnown RBP14.8□□□□□ -0.04
MED28-203ENST00000503945 ERO1AQ96HE7 468 aa14.8□□□□□ -0.04
MED28-203ENST00000503945 NEUROD6Q96NK8 337 aa14.8□□□□□ -0.04
MED28-203ENST00000503945 ELP3Q9H9T3 547 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms